Detail information of GWHGAAEX000330/evm.TU.scaffold_0.531


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG12780Endosomal membrane proteins, EMP70
nrgi|743755322|ref|XP_010904776.1|0PREDICTED: transmembrane 9 superfamily member 7-like isoform X2 [Elaeis guineensis]
Swissprottr|Q9LIC2|TMN7_ARATH0Transmembrane 9 superfamily member 7 {ECO:0000305} (Precursor)
trEMBLtr|A0A068TNK0|A0A068TNK0_COFCA0Coffea canephora
TAIRAT3G137720transmembrane nine 7

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000142426009424273305+
Transcript Sequence

Network for GWHGAAEX000330

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02990.15EMP70545926.00E-221
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms169.050
SRR2545915Juvenile tuber175.560
SRP108465SRR5643513five period of Gastrodia elata129.790
SRR5643514five period of Gastrodia elata110.690
SRR5643515five period of Gastrodia elata108.590
SRR5643524five period of Gastrodia elata119.980
SRR5643525five period of Gastrodia elata136.240
SRR5643528five period of Gastrodia elata122.680
SRR5643658five period of Gastrodia elata159.640
SRR5643659five period of Gastrodia elata128.860
SRR5643660five period of Gastrodia elata128.150
SRR5643661five period of Gastrodia elata126.560
SRR5643662five period of Gastrodia elata127.580
SRR5643663five period of Gastrodia elata138.230
SRR5643664five period of Gastrodia elata119.440
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1161.120
SRR6049655Rhizomagastrodiae_C368-T10_good_1113.980
SRR6049656Rhizomagastrodiae_C368-T07_good_1126.450
SRR6049657Rhizomagastrodiae_C368-T07_good_1185.850
SRR6049658Rhizomagastrodiae_C368-T04_good_1136.030
SRR6049659Rhizomagastrodiae_C368-T04_good_1168.910
SRR6049660Rhizomagastrodiae_C368-T01_good_1140.020
SRR6049661Rhizomagastrodiae_C368-T04_good_1140.370
SRR6049662Rhizomagastrodiae_C368-T01_good_1134.210
SRR6049663Rhizomagastrodiae_C368-T01_good_1123.210
SRR6049664Rhizomagastrodiae_C368-T10_good_1112.250
SRR6049665Rhizomagastrodiae_C368-T10_good_1112.250
SRP279888GastroGastrodia elata tuber 99.38
JuvenJuvenile tuber164.76
Mother_GastroMother tuber of Gastrodia elata 83.82
Mother_JuvenMother tuber of Juvenile 122.76