Detail information of GWHGAAEX000345/evm.TU.scaffold_1.14


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|183220663|ref|YP_001838659.1|5.00E-143inosine-5'-monophosphate dehydrogenase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)']
KOGKOG25500IMP dehydrogenase/GMP reductase
nrgi|743778972|ref|XP_010919949.1|0PREDICTED: inosine-5'-monophosphate dehydrogenase-like [Elaeis guineensis]
Swissprottr|Q84XA3|IMDH_VIGUN0Inosine-5'-monophosphate dehydrogenase {ECO:0000255|HAMAP-Rule:MF_03156}
trEMBLtr|M0SZJ0|M0SZJ0_MUSAM0Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_03156}
TAIRAT1G163500Aldolase-type TIM barrel family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000008806029816165-
Transcript Sequence

Network for GWHGAAEX000345

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00478.24IMPDH214901.30E-121
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K00088IMPDH, guaB Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Purine metabolismmap00230
Drug metabolism - other enzymesmap00983

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0006164Biological Processpurine nucleotide biosynthetic process
GO:0003938Molecular FunctionIMP dehydrogenase activity
GO:0016491Molecular Functionoxidoreductase activity
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms32.770
SRR2545915Juvenile tuber40.580
SRP108465SRR5643513five period of Gastrodia elata94.110
SRR5643514five period of Gastrodia elata87.780
SRR5643515five period of Gastrodia elata82.230
SRR5643524five period of Gastrodia elata103.100
SRR5643525five period of Gastrodia elata87.400
SRR5643528five period of Gastrodia elata83.630
SRR5643658five period of Gastrodia elata78.650
SRR5643659five period of Gastrodia elata86.170
SRR5643660five period of Gastrodia elata84.520
SRR5643661five period of Gastrodia elata93.670
SRR5643662five period of Gastrodia elata69.510
SRR5643663five period of Gastrodia elata73.850
SRR5643664five period of Gastrodia elata63.720
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_163.090
SRR6049655Rhizomagastrodiae_C368-T10_good_193.460
SRR6049656Rhizomagastrodiae_C368-T07_good_173.070
SRR6049657Rhizomagastrodiae_C368-T07_good_158.670
SRR6049658Rhizomagastrodiae_C368-T04_good_146.330
SRR6049659Rhizomagastrodiae_C368-T04_good_146.650
SRR6049660Rhizomagastrodiae_C368-T01_good_159.060
SRR6049661Rhizomagastrodiae_C368-T04_good_156.790
SRR6049662Rhizomagastrodiae_C368-T01_good_175.840
SRR6049663Rhizomagastrodiae_C368-T01_good_167.330
SRR6049664Rhizomagastrodiae_C368-T10_good_191.450
SRR6049665Rhizomagastrodiae_C368-T10_good_191.450
SRP279888GastroGastrodia elata tuber 59.50
JuvenJuvenile tuber118.25
Mother_GastroMother tuber of Gastrodia elata 42.81
Mother_JuvenMother tuber of Juvenile 59.92