Detail information of GWHGAAEX000373/evm.TU.scaffold_1.51


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG34576.00E-18Sec61 protein translocation complex, beta subunit
nrgi|357518959|ref|XP_003629768.1|2.16E-17Protein transport protein Sec61 beta subunit [Medicago truncatula]
Swissprottr|P38389|SC61B_ARATH2.00E-17Protein transport protein Sec61 subunit beta
trEMBLtr|A0A0A0L6Y8|A0A0A0L6Y8_CUCSA8.00E-20Uncharacterized protein {ECO:0000313|EMBL:KGN56357.1}
TAIRAT3G605406.00E-18Preprotein translocase Sec, Sec61-beta subunit protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000826313372632045-
Transcript Sequence

Network for GWHGAAEX000373

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03911.15Sec61_beta33721.50E-14
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K09481SEC61B, SBH2 Protein export map03060
Protein processing in endoplasmic reticulummap04141
Phagosomemap04145

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms9.050
SRR2545915Juvenile tuber10.230
SRP108465SRR5643513five period of Gastrodia elata16.810
SRR5643514five period of Gastrodia elata24.720
SRR5643515five period of Gastrodia elata17.420
SRR5643524five period of Gastrodia elata24.320
SRR5643525five period of Gastrodia elata8.430
SRR5643528five period of Gastrodia elata25.310
SRR5643658five period of Gastrodia elata14.290
SRR5643659five period of Gastrodia elata11.320
SRR5643660five period of Gastrodia elata12.310
SRR5643661five period of Gastrodia elata10.010
SRR5643662five period of Gastrodia elata5.420
SRR5643663five period of Gastrodia elata15.180
SRR5643664five period of Gastrodia elata9.810
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_117.370
SRR6049655Rhizomagastrodiae_C368-T10_good_17.210
SRR6049656Rhizomagastrodiae_C368-T07_good_121.520
SRR6049657Rhizomagastrodiae_C368-T07_good_114.760
SRR6049658Rhizomagastrodiae_C368-T04_good_120.550
SRR6049659Rhizomagastrodiae_C368-T04_good_115.810
SRR6049660Rhizomagastrodiae_C368-T01_good_118.570
SRR6049661Rhizomagastrodiae_C368-T04_good_123.120
SRR6049662Rhizomagastrodiae_C368-T01_good_128.790
SRR6049663Rhizomagastrodiae_C368-T01_good_123.890
SRR6049664Rhizomagastrodiae_C368-T10_good_122.250
SRR6049665Rhizomagastrodiae_C368-T10_good_122.250
SRP279888GastroGastrodia elata tuber 12.42
JuvenJuvenile tuber2.90
Mother_GastroMother tuber of Gastrodia elata 13.28
Mother_JuvenMother tuber of Juvenile 2.69