Detail information of GWHGAAEX000383/evm.TU.scaffold_1.71


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743796772|ref|XP_010924811.1|1.68E-85PREDICTED: myosin IB heavy chain-like isoform X1 [Elaeis guineensis]
trEMBLtr|A0A061G2J9|A0A061G2J9_THECC1.00E-81Myosin heavy chain-related isoform 1 {ECO:0000313|EMBL:EOY23437.1}
TAIRAT5G533106.00E-68myosin heavy chain-related

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000835423403578202-
Transcript Sequence

Network for GWHGAAEX000383

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06017.12Myosin_TH1712415.70E-31
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003774Molecular Functionmotor activity
GO:0016459Cellular Componentmyosin complex

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms34.660
SRR2545915Juvenile tuber28.410
SRP108465SRR5643513five period of Gastrodia elata22.090
SRR5643514five period of Gastrodia elata17.510
SRR5643515five period of Gastrodia elata19.210
SRR5643524five period of Gastrodia elata18.180
SRR5643525five period of Gastrodia elata21.710
SRR5643528five period of Gastrodia elata17.710
SRR5643658five period of Gastrodia elata22.500
SRR5643659five period of Gastrodia elata17.880
SRR5643660five period of Gastrodia elata19.070
SRR5643661five period of Gastrodia elata16.720
SRR5643662five period of Gastrodia elata17.960
SRR5643663five period of Gastrodia elata16.490
SRR5643664five period of Gastrodia elata14.740
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_119.280
SRR6049655Rhizomagastrodiae_C368-T10_good_133.500
SRR6049656Rhizomagastrodiae_C368-T07_good_121.870
SRR6049657Rhizomagastrodiae_C368-T07_good_123.140
SRR6049658Rhizomagastrodiae_C368-T04_good_126.690
SRR6049659Rhizomagastrodiae_C368-T04_good_126.940
SRR6049660Rhizomagastrodiae_C368-T01_good_121.960
SRR6049661Rhizomagastrodiae_C368-T04_good_125.200
SRR6049662Rhizomagastrodiae_C368-T01_good_127.850
SRR6049663Rhizomagastrodiae_C368-T01_good_134.980
SRR6049664Rhizomagastrodiae_C368-T10_good_123.910
SRR6049665Rhizomagastrodiae_C368-T10_good_123.910
SRP279888GastroGastrodia elata tuber 20.65
JuvenJuvenile tuber33.72
Mother_GastroMother tuber of Gastrodia elata 18.77
Mother_JuvenMother tuber of Juvenile 22.89