Detail information of GWHGAAEX000385/evm.TU.scaffold_1.75


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG13564.00E-145Putative transcription factor 5qNCA, contains JmjC domain
nrgi|695011078|ref|XP_009392240.1|0PREDICTED: lysine-specific demethylase JMJ25-like isoform X2 [Musa acuminata subsp. malaccensis]
Swissprottr|Q9SSE9|JMJ25_ARATH2.00E-75Lysine-specific demethylase JMJ25
trEMBLtr|M0SEI6|M0SEI6_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P14190_001}
TAIRAT1G623104.00E-145transcription factor jumonji (jmjC) domain-containing protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000837022643709336+
Transcript Sequence

Network for GWHGAAEX000385

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K15601KDM3 Thermogenesis map04714

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms33.810
SRR2545915Juvenile tuber28.140
SRP108465SRR5643513five period of Gastrodia elata20.920
SRR5643514five period of Gastrodia elata20.700
SRR5643515five period of Gastrodia elata16.630
SRR5643524five period of Gastrodia elata17.870
SRR5643525five period of Gastrodia elata21.300
SRR5643528five period of Gastrodia elata15.080
SRR5643658five period of Gastrodia elata23.360
SRR5643659five period of Gastrodia elata23.370
SRR5643660five period of Gastrodia elata23.300
SRR5643661five period of Gastrodia elata22.540
SRR5643662five period of Gastrodia elata20.270
SRR5643663five period of Gastrodia elata22.800
SRR5643664five period of Gastrodia elata19.850
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_124.640
SRR6049655Rhizomagastrodiae_C368-T10_good_115.420
SRR6049656Rhizomagastrodiae_C368-T07_good_123.090
SRR6049657Rhizomagastrodiae_C368-T07_good_128.610
SRR6049658Rhizomagastrodiae_C368-T04_good_127.150
SRR6049659Rhizomagastrodiae_C368-T04_good_132.070
SRR6049660Rhizomagastrodiae_C368-T01_good_127.970
SRR6049661Rhizomagastrodiae_C368-T04_good_128.460
SRR6049662Rhizomagastrodiae_C368-T01_good_122.310
SRR6049663Rhizomagastrodiae_C368-T01_good_125.140
SRR6049664Rhizomagastrodiae_C368-T10_good_119.310
SRR6049665Rhizomagastrodiae_C368-T10_good_119.310
SRP279888GastroGastrodia elata tuber 19.80
JuvenJuvenile tuber21.79
Mother_GastroMother tuber of Gastrodia elata 8.86
Mother_JuvenMother tuber of Juvenile 10.16