Detail information of GWHGAAEX000387/evm.TU.scaffold_1.77


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672135569|ref|XP_008791453.1|4.92E-112PREDICTED: girdin-like [Phoenix dactylifera]
trEMBLtr|M0TKE9|M0TKE9_MUSAM3.00E-38Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P24630_001}
TAIRAT5G417906.00E-06COP1-interactive protein 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000837511213769899+
Transcript Sequence

Network for GWHGAAEX000387

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07765.11KIP122710.00017
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003779Molecular Functionactin binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms30.090
SRR2545915Juvenile tuber30.810
SRP108465SRR5643513five period of Gastrodia elata23.750
SRR5643514five period of Gastrodia elata23.580
SRR5643515five period of Gastrodia elata23.310
SRR5643524five period of Gastrodia elata22.840
SRR5643525five period of Gastrodia elata3.320
SRR5643528five period of Gastrodia elata4.610
SRR5643658five period of Gastrodia elata2.790
SRR5643659five period of Gastrodia elata37.600
SRR5643660five period of Gastrodia elata41.620
SRR5643661five period of Gastrodia elata40.970
SRR5643662five period of Gastrodia elata27.780
SRR5643663five period of Gastrodia elata27.910
SRR5643664five period of Gastrodia elata17.710
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_126.810
SRR6049655Rhizomagastrodiae_C368-T10_good_123.430
SRR6049656Rhizomagastrodiae_C368-T07_good_132.960
SRR6049657Rhizomagastrodiae_C368-T07_good_123.730
SRR6049658Rhizomagastrodiae_C368-T04_good_123.400
SRR6049659Rhizomagastrodiae_C368-T04_good_121.640
SRR6049660Rhizomagastrodiae_C368-T01_good_122.020
SRR6049661Rhizomagastrodiae_C368-T04_good_120.810
SRR6049662Rhizomagastrodiae_C368-T01_good_129.400
SRR6049663Rhizomagastrodiae_C368-T01_good_129.740
SRR6049664Rhizomagastrodiae_C368-T10_good_140.400
SRR6049665Rhizomagastrodiae_C368-T10_good_140.400
SRP279888GastroGastrodia elata tuber 14.32
JuvenJuvenile tuber22.57
Mother_GastroMother tuber of Gastrodia elata 10.37
Mother_JuvenMother tuber of Juvenile 19.14