Gene detail

Detail information of GWHGAAEX000387/evm.TU.scaffold_1.77

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672135569\|ref\|XP_008791453.1\|	4.92E-112	PREDICTED: girdin-like [Phoenix dactylifera]
trEMBL	tr\|M0TKE9\|M0TKE9_MUSAM	3.00E-38	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr7P24630_001}
TAIR	AT5G41790	6.00E-06	COP1-interactive protein 1

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000008	3751121	3769899	+

Transcript Sequence
>GWHTAAEX000387 ATGAAGAAAAAACACAAGTTCCATAAATTTCTGAACTCTGTTGTCAAGTCCCATGGAGATATTGAGGAGGATTGGAAAGAAATCGAAAACAATGTGAAAAGAATGTTGGATCTATTCGAGAACAACAATGAAGATGCATCTGAACGATCTGACTTTGTTTCTCTTGTAAATGATATCAAAAAAAGATATCATGCTCTGTATGGGCGGCATGATGGATTGATTTGTAAGTTAAAGAACAAAGTACAGCACAGAAAAGGTGAGTCTAGTTCAGGATCTTCTGGTTCAGCATCTGAAGATTCGTCTGATGATGATGGGCCAATTGACATTCAGGAACAAAAATTAGCGAACCAGCTCCTCTCTATGGAAGACCACCAATCTCTTGAGGAGCAGATAAATAATCTGAGTAAACGAAATTTTGAGCTTGAGTCTCGGACTATTGTAATGCATGAAAAACTGGAAGAAAGTCAACATCTAGCAGGTGAGTTGATAGAAATGGGAACAGTCATTGTGAAATTAAAAGATGAACTTCAATCTGTGAGAAATAGTCTCAAGCTCTCAGATTCTGAAAATGAGTCTCTCAAAGCAGAAATAGAGAAATCAAAAGAGCAAGGAGTTAAGTTGAGTCTTATGGTAAGCAGTTTACGGGAAGAAAATGAAGCTTTCATATCAGAGAAGGAAAGAGCTTCAAGCGTGCTGCTTCAGGCTGACAACTCCATCACAGAGCTGAAACTTGAACTTGAAAAGATTAAAGAGGATTCTAAGAAACTACGAGAAGACAACAATTTTCTAAAGGAAGACTTGGAAAAAAAAGATCAGGAATTGGCGGGCCTGAATCAGCAAATGGTGATGTTAGGCGAGGAACTGGAAACCTTAAATGTAGTGGTAAATGAGCTTATATCATCCAATAAAAATCTTACATCTGAAAATCAAAATCTGAGGGCTGAAAAGGAAGTAGCTATTCAGCAAGTTTCCAATCAAGAAGGTAACTTGTTGATGATGGAAGGAGACAATGATGCCTTGAAATGTGAGATTCTTAAGATATCAACCCTCATGCACGAGGCTGATAAAACCAGAGAGGATTTGACAGTAGAATCTGGACTTCTGAAGGAGAGCATCTCAAAGCTGCAAGACACAATTGCTGATCTAAATCATCAGCTGCAAGTGAAAAATGATGAAAATTATGCAATGGCATTTGAATCATCAGAATCTAGAAAGTTGTTTCAAGCGGCAGATGAAAGAATTTTGGTTTTGCAAGCTGAAGCAAAAAGATTGAAGAGTGAAAATTTCATGGTTCTTAGTGGACATGAAAATTTAAGGCTAGACTTGGAAGGTAATAGCCAGAAACTGAATTCACTGAGAGAAGAAAATGCCCAGATTTTGACCAAGCATGAAGATCTAAAGCTGGAGCTGGAAGTTAGTATTCAGGAACTGTCAAAAGCAAAGCAAGCCTTGGAAGCGTCAGATTGTGAAAGGAATTCGCTAATTGAGGAAAATTCATCTCTTTTGAGCATGATAAGTGAGCGTGGAGTGGCCATTGATGGTCTCAAAGCTCAGATAAAAGAAATAGAAAGTGTAAAGCCTCAACTGTTGCTGAAAATTAGTAATATGAACCTTGAAATCGGTGATGTGAAAACTAAACTTGTTGCTTCTGAAGAAGAGAAAGAGGCTTTAGTTTCAGAAAAATTAGTGGTTGAAAGCAAGCTACACGAAGCAGAGTTTATGAAAGAGGCGTTACAGACCCAGTTGGAAGAATTGAATTCTGAAAAATCTTTCCTCTTGAGAAAGTTAGAGGAAAGTGAGAGGGTTTCAACTGATTTAAAGCTTGAAAGAGATGGGCTAGCAGCTGATAATGAACTTCTGCAGCTTAAGGTAAAGGAGCTTGTAGCAGAATTTGAAGCAGCAAATATGCGGCTGGATTATCTAGAAAAACAAACTCCTTTTGTTGAGGAAAAAGACAAGCTGGTATCAGAAATTTCAGTTATGGAAGGCAAGTTACTACTGGCAGAAGCCGACAACAAGAAACTAGAGAGAGAGTTAGAACTGTTAAGCGACAAGAATGCAGCTTTCCGACAAAATCAAGGTCTGCATAACGAGATGGTTGAACATAACAAAAAAGTCGAAGTTACATTCAGTGAAATGCTAGACCTGAAGGATAAATTAGAACAAGGCCGAAAGGAAATTTTGCAGGATGTTCAAACATGGATTGCTACATCCAAAGGAGATCTTCTAAAGATGATAAATGAAAATGGTTATTTAAACCAAGAGATTAAAAGGCTGTCAGAAATATCTTCAGAGAATGAAGCGTTGCTGAGAAAAATGAAAGATAGGTTGAATGCTAAAATATCAGAACAGGAGGATCTGCTTGAAAGCCACGAGGAGCTACTTACCAAACACAAGCAGTTAGAAGATAGTTATCACGAATTCTGTGCAAAACTGGGCGGGGCAGATAAGAAAGCTGATGAACTCAAAAATAAAGAAGAGATTATCCAAAGATTGGAGCGAATTTGCGTAGAGCAGAAAAGTGACATTGATAAGTGGGGTGAAATTCACAAAGAACTGATAGAGAAGCTCTCATCAATGGAAGCAGGAAAAGTAGATGCAGAGAAGGAAATCCAAAGGCTTGAAGTCCAGATTCGCTTGTCAAACCAGAAACTTAAGGTAACTGAAACTGAATACAGGGAGAAGGAGGAGAACCACTATAGGTTGGTTGCAGGATTACAAGAAGAAGTTTGGTTAATTAACCGGCAGGTTGTTTTATGGTCTAGAAAGTTTTCCGATTTAAACGATGAATGTAAGCAAATTAAAGGAGCACTAGAAGCTGGTGTGGGAACTTTGGCTAGTGAGCTCTCTCAATTGGTGTCAACAACACTGGAGAGCATGGGACATATTAAAAACCAACTTGCTGAATGCCTTCTTGAGCTACGGAACTTGAAAATTTCGCTAGAAACAGAATCACATGCGAAGAAAAAGCTCGAGAATGTGAATCATGAGCTAGAATTGGGGTTGACATACAAGGAAGGGATCATCTTGAAATTAAAGGATGAAGCAAGTCAAAAGCTATCCCGTTTGGATGAGAAGGAGAAGGAGTTAAGGACTTTGGAGAGGAGGATTACCGAGTCCGACAAGAGTCTCAAAGAGAAGGAAAGGGAGGTTCTAAACAAAGATGAAGAGAAAAGGGAAGCCATACGACAACTTTGCTTGCTGATTGAGTACCATTGGGAGAATCACAATTATCTTGTCGGATACCTGTCATCAGTGTTTAGGAGCAGGGAAACCACTTGA

Network for GWHGAAEX000387

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF07765.11	KIP1	22	71	0.00017

Protein Sequence

>GWHPAAEX000387
MKKKHKFHKFLNSVVKSHGDIEEDWKEIENNVKRMLDLFENNNEDASERSDFVSLVNDIKKRYHALYGRHDGLICKLKNKVQHRKGESSSGSSGSASEDSSDDDGPIDIQEQKLANQLLSMEDHQSLEEQINNLSKRNFELESRTIVMHEKLEESQHLAGELIEMGTVIVKLKDELQSVRNSLKLSDSENESLKAEIEKSKEQGVKLSLMVSSLREENEAFISEKERASSVLLQADNSITELKLELEKIKEDSKKLREDNNFLKEDLEKKDQELAGLNQQMVMLGEELETLNVVVNELISSNKNLTSENQNLRAEKEVAIQQVSNQEGNLLMMEGDNDALKCEILKISTLMHEADKTREDLTVESGLLKESISKLQDTIADLNHQLQVKNDENYAMAFESSESRKLFQAADERILVLQAEAKRLKSENFMVLSGHENLRLDLEGNSQKLNSLREENAQILTKHEDLKLELEVSIQELSKAKQALEASDCERNSLIEENSSLLSMISERGVAIDGLKAQIKEIESVKPQLLLKISNMNLEIGDVKTKLVASEEEKEALVSEKLVVESKLHEAEFMKEALQTQLEELNSEKSFLLRKLEESERVSTDLKLERDGLAADNELLQLKVKELVAEFEAANMRLDYLEKQTPFVEEKDKLVSEISVMEGKLLLAEADNKKLERELELLSDKNAAFRQNQGLHNEMVEHNKKVEVTFSEMLDLKDKLEQGRKEILQDVQTWIATSKGDLLKMINENGYLNQEIKRLSEISSENEALLRKMKDRLNAKISEQEDLLESHEELLTKHKQLEDSYHEFCAKLGGADKKADELKNKEEIIQRLERICVEQKSDIDKWGEIHKELIEKLSSMEAGKVDAEKEIQRLEVQIRLSNQKLKVTETEYREKEENHYRLVAGLQEEVWLINRQVVLWSRKFSDLNDECKQIKGALEAGVGTLASELSQLVSTTLESMGHIKNQLAECLLELRNLKISLETESHAKKKLENVNHELELGLTYKEGIILKLKDEASQKLSRLDEKEKELRTLERRITESDKSLKEKEREVLNKDEEKREAIRQLCLLIEYHWENHNYLVGYLSSVFRSRETT

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0003779	Molecular Function	actin binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	30.090
SRP064423	SRR2545915	Juvenile tuber	30.810
SRP108465	SRR5643513	five period of Gastrodia elata	23.750
	SRR5643514	five period of Gastrodia elata	23.580
	SRR5643515	five period of Gastrodia elata	23.310
	SRR5643524	five period of Gastrodia elata	22.840
	SRR5643525	five period of Gastrodia elata	3.320
	SRR5643528	five period of Gastrodia elata	4.610
	SRR5643658	five period of Gastrodia elata	2.790
	SRR5643659	five period of Gastrodia elata	37.600
	SRR5643660	five period of Gastrodia elata	41.620
	SRR5643661	five period of Gastrodia elata	40.970
	SRR5643662	five period of Gastrodia elata	27.780
	SRR5643663	five period of Gastrodia elata	27.910
	SRR5643664	five period of Gastrodia elata	17.710
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	26.810
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	23.430
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	32.960
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	23.730
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	23.400
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	21.640
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	22.020
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	20.810
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	29.400
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	29.740
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	40.400
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	40.400
SRP279888	Gastro	Gastrodia elata tuber	14.32
	Juven	Juvenile tuber	22.57
	Mother_Gastro	Mother tuber of Gastrodia elata	10.37
	Mother_Juven	Mother tuber of Juvenile	19.14