Detail information of GWHGAAEX000393/evm.TU.scaffold_1.86


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|154252573|ref|YP_001413397.1|3.00E-152ATP-dependent metalloprotease FtsH [Parvibaculum lavamentivorans DS-1]
KOGKOG07340AAA+-type ATPase containing the peptidase M41 domain
nrgi|571496976|ref|XP_006593756.1|0PREDICTED: ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial-like [Glycine max]
Swissprottr|Q9FGM0|FTSHB_ARATH0ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial (Precursor)
trEMBLtr|K7LXZ1|K7LXZ1_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G08155.1}
TAIRAT5G531700FTSH protease 11

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000839623443986879+
Transcript Sequence

Network for GWHGAAEX000393

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00004.28AAA21303.40E-40
PF01434.17Peptidase_M411923876.10E-69
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K08955YME1 Mitophagy - yeast map04139

Gene Ontology

GO term OntologyName
GO:0006508Biological Processproteolysis
GO:0005524Molecular FunctionATP binding
GO:0004222Molecular Functionmetalloendopeptidase activity
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms45.180
SRR2545915Juvenile tuber36.890
SRP108465SRR5643513five period of Gastrodia elata24.190
SRR5643514five period of Gastrodia elata30.530
SRR5643515five period of Gastrodia elata26.660
SRR5643524five period of Gastrodia elata28.030
SRR5643525five period of Gastrodia elata41.450
SRR5643528five period of Gastrodia elata34.780
SRR5643658five period of Gastrodia elata42.990
SRR5643659five period of Gastrodia elata36.820
SRR5643660five period of Gastrodia elata38.710
SRR5643661five period of Gastrodia elata34.820
SRR5643662five period of Gastrodia elata34.370
SRR5643663five period of Gastrodia elata37.080
SRR5643664five period of Gastrodia elata38.670
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_133.650
SRR6049655Rhizomagastrodiae_C368-T10_good_115.580
SRR6049656Rhizomagastrodiae_C368-T07_good_132.430
SRR6049657Rhizomagastrodiae_C368-T07_good_138.420
SRR6049658Rhizomagastrodiae_C368-T04_good_152.820
SRR6049659Rhizomagastrodiae_C368-T04_good_147.280
SRR6049660Rhizomagastrodiae_C368-T01_good_141.380
SRR6049661Rhizomagastrodiae_C368-T04_good_141.380
SRR6049662Rhizomagastrodiae_C368-T01_good_125.960
SRR6049663Rhizomagastrodiae_C368-T01_good_131.700
SRR6049664Rhizomagastrodiae_C368-T10_good_124.040
SRR6049665Rhizomagastrodiae_C368-T10_good_124.040
SRP279888GastroGastrodia elata tuber 46.05
JuvenJuvenile tuber43.53
Mother_GastroMother tuber of Gastrodia elata 47.02
Mother_JuvenMother tuber of Juvenile 49.45