Gene detail

Detail information of GWHGAAEX000405/evm.TU.scaffold_1.98

Functional Annotation

Database	Orthologs	Annotation
KOG	KOG0565	Inositol polyphosphate 5-phosphatase and related proteins
nr	gi\|695017712\|ref\|XP_009395800.1\|	PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase 1-like isoform X3 [Musa acuminata subsp. malaccensis]
Swissprot	tr\|Q84MA2\|IP5P1_ARATH	Type I inositol 1,4,5-trisphosphate 5-phosphatase 1
trEMBL	tr\|M0UB60\|M0UB60_MUSAM	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_AchrUn_randomP21520_001}
TAIR	AT1G71710	DNAse I-like superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000008	4413565	4454629	+

Transcript Sequence
>GWHTAAEX000405 GTATTTGGGACGCCCGACATGGCTGTTTGGTTTGGTTCCTTCTTCGTTGAGAATAAAATGCTGCCTATTTATATATATAGCTAAGACGAAGAGAAAAACAAGGGAAGAAACCAGCTTTCAACGAGCTGTTCCGAGAATGCGACCGGGATCGGGGAAGAAGAAGCAAGAGCTTTGGCCCAAGATTGTGCTCCGGAAATGGCTCAACATCAGCTCCAAGGATTCCGACTTCAGTGCCGACGAAGGGGAGAGTACCGAGAGCGAGTTCGAATACGAGGAGATGTGTCGATGGGAGCGCGAATTACGAGACAAGGAGTGCAAATTAGCTGTGAATGGGGTTGAATCAAATGGGTGTCGCACGGATGATATTCCATGCCGAAGGCGAAGGAGAAATTCAGAGACCCTTCGTGCTCAGTTTATAAATATCAAAGAACTCAGGATATGCATGGGAACATGGAACGTTGGTGGTAAACTTCCTCCTGATGACCTTGAAATCGAGGACTGGCTGGACATGGAAGAGCCAGCTGATATATATGTGCTAGGCTTGCAGGAGATTGTTCCATTGAATGCTGGCAACATTTTTGGTGCTGAGGACAATGGGCCTGTTCCAAGATGGGAATCTCTTGTTCGCCAGACATTAAATAGGATTCAACCAACTAAACCCAAATATAAATGCTTTAGTGACCCCCCTTCACCATCAAGGTTTCAATCAATTGAATATACCCTTGGTATTGAAGATGCATTATTACAAGTGAGCGATAGTGAGATTGGCGAGGGAATCAATCCACTCGAAGATGATTTACTTGATTTAGAAGAAAACTTTTGTAGCCGCACAGTTAATGAAGATGAGTTAAGTGGAAATATAATTTCTAGCTTTACAGATGCTGATTTGGTTAGTTCACAAGATTTGGATCATCTGCCACTCTCACAAAGAATGCTTAAAAAACCCCATTGTTCAAGTTTTAAAAATCGTCAAGCAGCACTAGATGCTTCAACAACTGAACAAAAAAGGCTCACCAAAACCCTTAATAGCTTTGAAAGGATTGGCTTGGTATGGCCAGAACAGCCACTTGACATATTAGCTCAACTTTCCTTAGATAGTTCATATGCAATTAAGTCATTAAAGTCTTTTAACAATCCCAATTATTTCAATTCAGTGAACCAGAAGGATGTTGCAGAATCAGGCTTGCCTCCTGAGTTAAAGATAGGTGATAATGTAAAGAAAAAGAAAAGATCATCTTTTGTGAGAATCGTAAGCAAGCAAATGGTTGGGATTTACCTATCAATATGGGTCCGCCGAAGTCTCAGAAAGCATATTCAGAACTTAAAAGTTTCCAGTGTTGGTGTAGGTGTCATGGGCTACATTGGCAATAAGGGATCAATATCTGTCAGCATGTCCATATACCAAACACTCTTTTCCTTTGTATGCTGTCACTTAACTTCTGGAGAAAAGGAAAGCGATAAACTTCGAAGAAATGTTGATGTTCAAGAAATTCACCGAAGAACACTATTTAGATCCATTTCTAGTTTTGGTTTACCAAAAACTATTTCTGATCACGAAAGAATTTTCTGGCTAGGTGACCTAAACTATCGCATTGATTTGTCTTACGAAATGACACACGACCTCATCTCAAGAAAGGAATGGTCTAAGCTACTTGAAGGTGATCAGTTAAAGAAGGAACTAAAGAAGGGGAAGGCTTTTGATGGTTGGTCAGAAGGCACAATCAATTTTCCTCCGACATACAAATATGAATTTAATTCTGAGAGGTACATTGGAGAGGATTCGAAGCATGGAAGGAGAACTCCAGCATGGTGTGATCGAATTCTATCATTTGGCAAAGGCATAAGGCTACTGGATTACAGAAGAACTGAGCTGAAGTTTTCGGATCACCGGCCGGTGACTGCAATATTTGCAGTTGACATTGAGTTACTGTCCTGCAGAAAGTTGCAAAGGGCTCTTACTTTCACGGATGCTGAAGTGGAGGAGGGAGAACATCAGCTGGATGAAGATACAGATGATGACTTGAGTCACTTGAGATTTTAGCTGAGGAAATCACTCGGCTGCAGTACACTGGCCTATATAGCTATAGGATGAAATAAGCACCTTTCGGGTATTTTGAAGATTAAAATCAGTGCATATCACCATGCTGATATGCATTGCAGCTGCAGCACAGTCCAGTATTTCAAAGAGCCATCTGCGTGGCTGCTGTAGACGAAGCCGCACTGGCAAAGCTGCTGCAATGGAAGCTGTGGCCTTGCATCCTTTTGTGTTTTTTGTATGGCTTATGCTGCTATTACATGCGTTTAATTTATTGATATGACAAATTCTTAGCAGCCTTGAAATAAAAATGCTGATATTTAATGTATAATAATTTTTGTTGTTTTATCAAATTTAAGATCAATTTCATTATCTAAATTAGTGCCAGG

Network for GWHGAAEX000405

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03372.22	Exo_endo_phos	104	584	1.40E-09

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0046856	Biological Process	phosphatidylinositol dephosphorylation

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	11.280
SRP064423	SRR2545915	Juvenile tuber	11.600
SRP108465	SRR5643513	five period of Gastrodia elata	11.290
	SRR5643514	five period of Gastrodia elata	13.850
	SRR5643515	five period of Gastrodia elata	13.520
	SRR5643524	five period of Gastrodia elata	13.060
	SRR5643525	five period of Gastrodia elata	9.860
	SRR5643528	five period of Gastrodia elata	12.760
	SRR5643658	five period of Gastrodia elata	14.210
	SRR5643659	five period of Gastrodia elata	7.040
	SRR5643660	five period of Gastrodia elata	6.570
	SRR5643661	five period of Gastrodia elata	7.710
	SRR5643662	five period of Gastrodia elata	3.470
	SRR5643663	five period of Gastrodia elata	5.860
	SRR5643664	five period of Gastrodia elata	3.840
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	10.330
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	10.410
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	10.390
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	8.990
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	7.820
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	9.410
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	9.630
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	9.380
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	11.900
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	10.840
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	14.100
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	14.100
SRP279888	Gastro	Gastrodia elata tuber	6.81
	Juven	Juvenile tuber	10.13
	Mother_Gastro	Mother tuber of Gastrodia elata	12.51
	Mother_Juven	Mother tuber of Juvenile	15.74