Detail information of GWHGAAEX000406/evm.TU.scaffold_1.99


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743754996|ref|XP_010928309.1|5.80E-117PREDICTED: tryptophan aminotransferase-related protein 3-like [Elaeis guineensis]
Swissprottr|Q93Z38|TAR4_ARATH2.00E-89Tryptophan aminotransferase-related protein 4
trEMBLtr|B9SED2|B9SED2_RICCO7.00E-100Alliin lyase, putative {ECO:0000313|EMBL:EEF38091.1}
TAIRAT1G34060_27.00E-89Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000844603804486651+
Transcript Sequence

Network for GWHGAAEX000406

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module6

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04863.12EGF_alliinase44975.30E-25
PF04864.12Alliinase_C992978.40E-79
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016846Molecular Functioncarbon-sulfur lyase activity
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms54.860
SRR2545915Juvenile tuber38.540
SRP108465SRR5643513five period of Gastrodia elata11.370
SRR5643514five period of Gastrodia elata7.900
SRR5643515five period of Gastrodia elata7.670
SRR5643524five period of Gastrodia elata7.730
SRR5643525five period of Gastrodia elata9.160
SRR5643528five period of Gastrodia elata6.960
SRR5643658five period of Gastrodia elata9.780
SRR5643659five period of Gastrodia elata7.980
SRR5643660five period of Gastrodia elata10.680
SRR5643661five period of Gastrodia elata9.340
SRR5643662five period of Gastrodia elata12.400
SRR5643663five period of Gastrodia elata7.530
SRR5643664five period of Gastrodia elata9.400
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_155.180
SRR6049655Rhizomagastrodiae_C368-T10_good_162.730
SRR6049656Rhizomagastrodiae_C368-T07_good_168.550
SRR6049657Rhizomagastrodiae_C368-T07_good_160.220
SRR6049658Rhizomagastrodiae_C368-T04_good_185.920
SRR6049659Rhizomagastrodiae_C368-T04_good_196.970
SRR6049660Rhizomagastrodiae_C368-T01_good_180.620
SRR6049661Rhizomagastrodiae_C368-T04_good_192.650
SRR6049662Rhizomagastrodiae_C368-T01_good_158.420
SRR6049663Rhizomagastrodiae_C368-T01_good_177.470
SRR6049664Rhizomagastrodiae_C368-T10_good_152.720
SRR6049665Rhizomagastrodiae_C368-T10_good_152.720
SRP279888GastroGastrodia elata tuber 34.02
JuvenJuvenile tuber23.23
Mother_GastroMother tuber of Gastrodia elata 31.22
Mother_JuvenMother tuber of Juvenile 14.05