Detail information of GWHGAAEX000418/evm.TU.scaffold_1.113


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|294055438|ref|YP_003549096.1|4.00E-136UDP-sugar pyrophosphorylase [Coraliomargarita akajimensis DSM 45221]
KOGKOG23880UDP-N-acetylglucosamine pyrophosphorylase
nrgi|743804515|ref|XP_010927211.1|0PREDICTED: UDP-sugar pyrophosphorylase [Elaeis guineensis]
Swissprottr|Q0GZS3|USP_CUCME0UDP-sugar pyrophosphorylase
trEMBLtr|M0U054|M0U054_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P13960_001}
TAIRAT5G525600UDP-sugar pyrophosphorylase

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000850229155068748-
Transcript Sequence

Network for GWHGAAEX000418

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01704.17UDPGP1442971.20E-14
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K12447USP Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Biosynthesis of antibioticsmap01130
Pentose and glucuronate interconversionsmap00040
Galactose metabolismmap00052
Ascorbate and aldarate metabolismmap00053
Amino sugar and nucleotide sugar metabolismmap00520

Gene Ontology

GO term OntologyName
GO:0070569Molecular Functionuridylyltransferase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms49.200
SRR2545915Juvenile tuber44.520
SRP108465SRR5643513five period of Gastrodia elata16.010
SRR5643514five period of Gastrodia elata17.130
SRR5643515five period of Gastrodia elata16.110
SRR5643524five period of Gastrodia elata19.060
SRR5643525five period of Gastrodia elata33.120
SRR5643528five period of Gastrodia elata40.260
SRR5643658five period of Gastrodia elata38.190
SRR5643659five period of Gastrodia elata18.840
SRR5643660five period of Gastrodia elata17.720
SRR5643661five period of Gastrodia elata17.420
SRR5643662five period of Gastrodia elata15.910
SRR5643663five period of Gastrodia elata18.170
SRR5643664five period of Gastrodia elata15.420
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_125.720
SRR6049655Rhizomagastrodiae_C368-T10_good_120.280
SRR6049656Rhizomagastrodiae_C368-T07_good_122.880
SRR6049657Rhizomagastrodiae_C368-T07_good_124.110
SRR6049658Rhizomagastrodiae_C368-T04_good_128.940
SRR6049659Rhizomagastrodiae_C368-T04_good_126.900
SRR6049660Rhizomagastrodiae_C368-T01_good_122.090
SRR6049661Rhizomagastrodiae_C368-T04_good_127.090
SRR6049662Rhizomagastrodiae_C368-T01_good_132.020
SRR6049663Rhizomagastrodiae_C368-T01_good_127.460
SRR6049664Rhizomagastrodiae_C368-T10_good_123.280
SRR6049665Rhizomagastrodiae_C368-T10_good_123.280
SRP279888GastroGastrodia elata tuber 21.63
JuvenJuvenile tuber22.37
Mother_GastroMother tuber of Gastrodia elata 31.67
Mother_JuvenMother tuber of Juvenile 41.81