Detail information of GWHGAAEX000419/evm.TU.scaffold_1.114


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG16037.00E-31Copper chaperone
nrgi|672113065|ref|XP_008809019.1|4.22E-44PREDICTED: copper transport protein CCH-like [Phoenix dactylifera]
Swissprottr|Q94BT9|ATOX1_ARATH5.00E-12Copper transport protein ATX1
trEMBLtr|V4UE60|V4UE60_9ROSI6.00E-43Uncharacterized protein {ECO:0000313|EMBL:ESR64332.1}
TAIRAT3G244507.00E-31Heavy metal transport/detoxification superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000850817045094893+
Transcript Sequence

Network for GWHGAAEX000419

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00403.25HMA711255.00E-16
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0030001Biological Processmetal ion transport
GO:0046872Molecular Functionmetal ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms4.980
SRR2545915Juvenile tuber26.090
SRP108465SRR5643513five period of Gastrodia elata2.160
SRR5643514five period of Gastrodia elata0.970
SRR5643515five period of Gastrodia elata3.410
SRR5643524five period of Gastrodia elata0.840
SRR5643525five period of Gastrodia elata5.980
SRR5643528five period of Gastrodia elata3.980
SRR5643658five period of Gastrodia elata4.490
SRR5643659five period of Gastrodia elata20.350
SRR5643660five period of Gastrodia elata19.230
SRR5643661five period of Gastrodia elata23.170
SRR5643662five period of Gastrodia elata7.230
SRR5643663five period of Gastrodia elata11.150
SRR5643664five period of Gastrodia elata7.750
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_12.390
SRR6049655Rhizomagastrodiae_C368-T10_good_10.520
SRR6049656Rhizomagastrodiae_C368-T07_good_11.700
SRR6049657Rhizomagastrodiae_C368-T07_good_11.530
SRR6049658Rhizomagastrodiae_C368-T04_good_11.240
SRR6049659Rhizomagastrodiae_C368-T04_good_11.140
SRR6049660Rhizomagastrodiae_C368-T01_good_10.590
SRR6049661Rhizomagastrodiae_C368-T04_good_11.380
SRR6049662Rhizomagastrodiae_C368-T01_good_10.350
SRR6049663Rhizomagastrodiae_C368-T01_good_10.380
SRR6049664Rhizomagastrodiae_C368-T10_good_10.770
SRR6049665Rhizomagastrodiae_C368-T10_good_10.770
SRP279888GastroGastrodia elata tuber 4.66
JuvenJuvenile tuber0.33
Mother_GastroMother tuber of Gastrodia elata 1.23
Mother_JuvenMother tuber of Juvenile 0.47