Detail information of GWHGAAEX000421/evm.TU.scaffold_1.116


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|108760265|ref|YP_635420.1|5.00E-79hypothetical protein MXAN_7307 [Myxococcus xanthus DK 1622]
nrgi|743754672|ref|XP_010912100.1|5.03E-170PREDICTED: uncharacterized protein LOC105038079 [Elaeis guineensis]
trEMBLtr|F2DZ50|F2DZ50_HORVD2.00E-169Predicted protein {ECO:0000313|EMBL:BAK00372.1}
TAIRAT4G134004.00E-1042-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000852240185306935-
Transcript Sequence

Network for GWHGAAEX000421

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14226.5DIOX_N251384.50E-07
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms33.960
SRR2545915Juvenile tuber39.920
SRP108465SRR5643513five period of Gastrodia elata35.530
SRR5643514five period of Gastrodia elata41.220
SRR5643515five period of Gastrodia elata36.390
SRR5643524five period of Gastrodia elata37.610
SRR5643525five period of Gastrodia elata47.420
SRR5643528five period of Gastrodia elata40.660
SRR5643658five period of Gastrodia elata59.510
SRR5643659five period of Gastrodia elata35.990
SRR5643660five period of Gastrodia elata35.320
SRR5643661five period of Gastrodia elata34.580
SRR5643662five period of Gastrodia elata31.730
SRR5643663five period of Gastrodia elata38.680
SRR5643664five period of Gastrodia elata31.900
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_169.480
SRR6049655Rhizomagastrodiae_C368-T10_good_173.490
SRR6049656Rhizomagastrodiae_C368-T07_good_162.410
SRR6049657Rhizomagastrodiae_C368-T07_good_168.240
SRR6049658Rhizomagastrodiae_C368-T04_good_182.600
SRR6049659Rhizomagastrodiae_C368-T04_good_199.620
SRR6049660Rhizomagastrodiae_C368-T01_good_177.200
SRR6049661Rhizomagastrodiae_C368-T04_good_179.770
SRR6049662Rhizomagastrodiae_C368-T01_good_180.990
SRR6049663Rhizomagastrodiae_C368-T01_good_186.190
SRR6049664Rhizomagastrodiae_C368-T10_good_166.210
SRR6049665Rhizomagastrodiae_C368-T10_good_166.210
SRP279888GastroGastrodia elata tuber 49.75
JuvenJuvenile tuber32.56
Mother_GastroMother tuber of Gastrodia elata 39.56
Mother_JuvenMother tuber of Juvenile 30.97