Detail information of GWHGAAEX000422/evm.TU.scaffold_1.117


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672182671|ref|XP_008811586.1|3.54E-108PREDICTED: auxin-responsive protein IAA1-like [Phoenix dactylifera]
Swissprottr|Q5VRD1|IAA1_ORYSJ1.00E-66Auxin-responsive protein IAA1
trEMBLtr|Q05FE7|Q05FE7_ELAGV1.00E-107Auxin-responsive protein {ECO:0000256|RuleBase:RU004549}
TAIRAT3G047301.00E-62indoleacetic acid-induced protein 16

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000853133275319064+
Transcript Sequence

Network for GWHGAAEX000422

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02309.15AUX_IAA372064.30E-62
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyAUX/IAA

KEGG pathway

KO Enzyme pathway mapID
K14484IAA Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms18.860
SRR2545915Juvenile tuber31.530
SRP108465SRR5643513five period of Gastrodia elata90.050
SRR5643514five period of Gastrodia elata117.390
SRR5643515five period of Gastrodia elata102.700
SRR5643524five period of Gastrodia elata97.260
SRR5643525five period of Gastrodia elata194.000
SRR5643528five period of Gastrodia elata126.170
SRR5643658five period of Gastrodia elata555.180
SRR5643659five period of Gastrodia elata59.790
SRR5643660five period of Gastrodia elata46.010
SRR5643661five period of Gastrodia elata41.050
SRR5643662five period of Gastrodia elata45.140
SRR5643663five period of Gastrodia elata61.250
SRR5643664five period of Gastrodia elata47.790
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1104.890
SRR6049655Rhizomagastrodiae_C368-T10_good_198.100
SRR6049656Rhizomagastrodiae_C368-T07_good_1109.920
SRR6049657Rhizomagastrodiae_C368-T07_good_177.260
SRR6049658Rhizomagastrodiae_C368-T04_good_169.100
SRR6049659Rhizomagastrodiae_C368-T04_good_165.840
SRR6049660Rhizomagastrodiae_C368-T01_good_181.990
SRR6049661Rhizomagastrodiae_C368-T04_good_175.020
SRR6049662Rhizomagastrodiae_C368-T01_good_1149.980
SRR6049663Rhizomagastrodiae_C368-T01_good_1106.080
SRR6049664Rhizomagastrodiae_C368-T10_good_1157.510
SRR6049665Rhizomagastrodiae_C368-T10_good_1157.510
SRP279888GastroGastrodia elata tuber 116.41
JuvenJuvenile tuber48.86
Mother_GastroMother tuber of Gastrodia elata 198.83
Mother_JuvenMother tuber of Juvenile 87.15