Detail information of GWHGAAEX000424/evm.TU.scaffold_1.119


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|389860848|ref|YP_006363088.1|7.00E-13translation elongation factor 1A [Thermogladius cellulolyticus 1633]
KOGKOG00524.00E-30Translation elongation factor EF-1 alpha/Tu
nrgi|336244415|gb|AEI28157.1|2.74E-30elongation factor 1-alpha [Lepidium sativum]
Swissprottr|Q40034|EF1A2_HORVU3.00E-31Elongation factor 1-alpha
trEMBLtr|G8Z925|G8Z925_LEPSV1.00E-30Elongation factor 1-alpha {ECO:0000313|EMBL:AEI28157.1} (Fragment)
TAIRAT5G603904.00E-30GTP binding Elongation factor Tu family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000853747525377202-
Transcript Sequence

Network for GWHGAAEX000424

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03231EEF1A RNA transport map03013

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.360
SRR2545915Juvenile tuber0.820
SRP108465SRR5643513five period of Gastrodia elata0.210
SRR5643514five period of Gastrodia elata0.310
SRR5643515five period of Gastrodia elata0.380
SRR5643524five period of Gastrodia elata0.000
SRR5643525five period of Gastrodia elata0.660
SRR5643528five period of Gastrodia elata0.630
SRR5643658five period of Gastrodia elata0.470
SRR5643659five period of Gastrodia elata0.170
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata0.370
SRR5643662five period of Gastrodia elata0.370
SRR5643663five period of Gastrodia elata0.000
SRR5643664five period of Gastrodia elata0.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.000
SRR6049655Rhizomagastrodiae_C368-T10_good_10.700
SRR6049656Rhizomagastrodiae_C368-T07_good_10.170
SRR6049657Rhizomagastrodiae_C368-T07_good_10.000
SRR6049658Rhizomagastrodiae_C368-T04_good_10.960
SRR6049659Rhizomagastrodiae_C368-T04_good_10.450
SRR6049660Rhizomagastrodiae_C368-T01_good_10.000
SRR6049661Rhizomagastrodiae_C368-T04_good_10.000
SRR6049662Rhizomagastrodiae_C368-T01_good_10.000
SRR6049663Rhizomagastrodiae_C368-T01_good_10.000
SRR6049664Rhizomagastrodiae_C368-T10_good_10.000
SRR6049665Rhizomagastrodiae_C368-T10_good_10.000
SRP279888GastroGastrodia elata tuber 0.13
JuvenJuvenile tuber0.62
Mother_GastroMother tuber of Gastrodia elata 0.00
Mother_JuvenMother tuber of Juvenile 0.33