Detail information of GWHGAAEX000428/evm.TU.scaffold_1.125


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|426401173|ref|YP_007020145.1|3.00E-1583-oxoacyl-(acyl-carrier-protein) synthase 2 [Candidatus Endolissoclinum faulkneri L2]
KOGKOG139403-oxoacyl-(acyl-carrier-protein) synthase (I and II)
nrgi|672119365|ref|XP_008782919.1|0PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial isoform X2 [Phoenix dactylifera]
Swissprottr|Q8L3X9|KASM_ARATH03-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial (Precursor)
trEMBLtr|D7TEG7|D7TEG7_VITVI03-oxoacyl-[acyl-carrier-protein] synthase {ECO:0000256|PIRNR:PIRNR000447}
TAIRAT2G045400Beta-ketoacyl synthase

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000855289935575011+
Transcript Sequence

Network for GWHGAAEX000428

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00109.25ketoacyl-synt383036.90E-56
PF02801.21Ketoacyl-synt_C3114272.10E-36
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K09458fabF, OXSM, CEM1 Metabolic pathways map01100
Fatty acid metabolismmap01212
Fatty acid biosynthesismap00061
Biotin metabolismmap00780

Gene Ontology

GO term OntologyName
GO:0006633Biological Processfatty acid biosynthetic process
GO:0003824Molecular Functioncatalytic activity
GO:0016747Molecular Functiontransferase activity, transferring acyl groups other than amino-acyl groups

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms21.820
SRR2545915Juvenile tuber23.310
SRP108465SRR5643513five period of Gastrodia elata19.340
SRR5643514five period of Gastrodia elata24.080
SRR5643515five period of Gastrodia elata26.880
SRR5643524five period of Gastrodia elata22.580
SRR5643525five period of Gastrodia elata18.530
SRR5643528five period of Gastrodia elata17.390
SRR5643658five period of Gastrodia elata16.220
SRR5643659five period of Gastrodia elata27.230
SRR5643660five period of Gastrodia elata39.390
SRR5643661five period of Gastrodia elata24.700
SRR5643662five period of Gastrodia elata23.080
SRR5643663five period of Gastrodia elata24.340
SRR5643664five period of Gastrodia elata29.760
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_126.090
SRR6049655Rhizomagastrodiae_C368-T10_good_132.700
SRR6049656Rhizomagastrodiae_C368-T07_good_121.500
SRR6049657Rhizomagastrodiae_C368-T07_good_126.050
SRR6049658Rhizomagastrodiae_C368-T04_good_129.190
SRR6049659Rhizomagastrodiae_C368-T04_good_131.600
SRR6049660Rhizomagastrodiae_C368-T01_good_123.880
SRR6049661Rhizomagastrodiae_C368-T04_good_131.680
SRR6049662Rhizomagastrodiae_C368-T01_good_120.420
SRR6049663Rhizomagastrodiae_C368-T01_good_126.100
SRR6049664Rhizomagastrodiae_C368-T10_good_123.470
SRR6049665Rhizomagastrodiae_C368-T10_good_123.470
SRP279888GastroGastrodia elata tuber 35.30
JuvenJuvenile tuber44.50
Mother_GastroMother tuber of Gastrodia elata 29.74
Mother_JuvenMother tuber of Juvenile 40.52