Detail information of GWHGAAEX000439/evm.TU.scaffold_1.137


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743854784|ref|XP_010941064.1|5.32E-98PREDICTED: uncharacterized protein LOC105059464 isoform X2 [Elaeis guineensis]
Swissprottr|Q8S9H7|DIV_ANTMA2.00E-32Transcription factor DIVARICATA
trEMBLtr|A0A068UP16|A0A068UP16_COFCA7.00E-94Coffea canephora
TAIRAT5G473906.00E-78myb-like transcription factor family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000859112465936514+
Transcript Sequence

Network for GWHGAAEX000439

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00249.30Myb_DNA-binding931373.60E-10
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyMYB-related

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms15.560
SRR2545915Juvenile tuber17.740
SRP108465SRR5643513five period of Gastrodia elata19.570
SRR5643514five period of Gastrodia elata18.700
SRR5643515five period of Gastrodia elata20.100
SRR5643524five period of Gastrodia elata20.600
SRR5643525five period of Gastrodia elata25.850
SRR5643528five period of Gastrodia elata26.660
SRR5643658five period of Gastrodia elata28.200
SRR5643659five period of Gastrodia elata19.310
SRR5643660five period of Gastrodia elata22.900
SRR5643661five period of Gastrodia elata21.690
SRR5643662five period of Gastrodia elata19.370
SRR5643663five period of Gastrodia elata18.990
SRR5643664five period of Gastrodia elata27.030
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_131.480
SRR6049655Rhizomagastrodiae_C368-T10_good_157.590
SRR6049656Rhizomagastrodiae_C368-T07_good_125.480
SRR6049657Rhizomagastrodiae_C368-T07_good_124.690
SRR6049658Rhizomagastrodiae_C368-T04_good_125.920
SRR6049659Rhizomagastrodiae_C368-T04_good_129.010
SRR6049660Rhizomagastrodiae_C368-T01_good_124.470
SRR6049661Rhizomagastrodiae_C368-T04_good_121.770
SRR6049662Rhizomagastrodiae_C368-T01_good_123.420
SRR6049663Rhizomagastrodiae_C368-T01_good_120.680
SRR6049664Rhizomagastrodiae_C368-T10_good_129.800
SRR6049665Rhizomagastrodiae_C368-T10_good_129.800
SRP279888GastroGastrodia elata tuber 28.13
JuvenJuvenile tuber51.76
Mother_GastroMother tuber of Gastrodia elata 28.87
Mother_JuvenMother tuber of Juvenile 34.65