Gene detail

Database	Orthologs	E value	Annotation
COG	gi\|258405220\|ref\|YP_003197962.1\|	2.00E-12	50S ribosomal protein L9 [Desulfohalobium retbaense DSM 5692]
KOG	KOG4607	6.00E-61	Mitochondrial ribosomal protein L9
nr	gi\|743831164\|ref\|XP_010934605.1\|	6.41E-94	PREDICTED: 50S ribosomal protein L9, chloroplastic [Elaeis guineensis]
Swissprot	tr\|Q1XDF2\|RK9_PYRYE	1.00E-07	50S ribosomal protein L9, chloroplastic {ECO:0000255\|HAMAP-Rule:MF_00503}
trEMBL	tr\|B8B068\|B8B068_ORYSI	1.00E-87	Putative uncharacterized protein {ECO:0000313\|EMBL:EEC79567.1}
TAIR	AT5G53070	6.00E-61	Ribosomal protein L9/RNase H1

Scaffold	Start	End	Strand
GWHAAEX00000008	6282502	6308560	+

Transcript Sequence
>GWHTAAEX000450 CAGCTGGTGATGGCCAACGCGCTCCGTCGGGGCTTCTACGGTTCAGCCTCTTCATGCAGCCGCGCTATCAATCCCTTGCTATTCGCCGGCCATGGTCTCAGATATCGGAAGCTTGAGGTCATTCTCACTACGACGATGGACAACCTGGGGAAGGCTGGAGAGACGGCCAAGGTCGCACCTGGGTATTTCCGCAACTATCTTATGCCCAACATGCTGGCCGTGCCCAACATACCCAAATTCGCGTTTTTGATCAGGGAACAGCGCAAGCTTTACCAACGTGATGAGGAGGAACAACTAAAAACCACCTTCAAAGTAAAAGAAGAGACTAGCCAGGAAAGTCAAATGAAAGAGTATGAAATGGCTGCAAAACGTCTAAATAATGTTCTACTGAATTTGAGGAGGCGCATCAAAGTTGATAACGAACTGCAGGAACCGGTGACTAAGGAAGATCTTGTTGCTGAGGTGGCTCGACAGCTTTGTGTAAATATCCATCCTACTAATATTCACCTGCCATCGCCCATTGCATCCCTCGGAGAGCACCAGGTAATTCTCCGGCTGCCCCATGAGATTCCTCGGCCCGAAGGGTTGCTGTATTGGACTCTTAATGTGAGGATCAGAAGAAAATGAAGTGAAGAATGCTGTAGGAATACTGACCTCTACAAGGCAGACAAAGTACCAAATGATATATATATATATAT

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Module ID	Function Annotation
Module2

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01281.18	Ribosomal_L9_N	36	72	3.40E-13
PF03948.13	Ribosomal_L9_C	115	187	2.60E-07

Protein Sequence

Gene family	subfamily
--	--

KO	Enzyme	pathway	mapID
K02939	RP-L9, MRPL9, rplI	Ribosome	map03010

GO term	Ontology	Name

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	13.900
SRP064423	SRR2545915	Juvenile tuber	23.260
SRP108465	SRR5643513	five period of Gastrodia elata	26.210
	SRR5643514	five period of Gastrodia elata	32.050
	SRR5643515	five period of Gastrodia elata	30.560
	SRR5643524	five period of Gastrodia elata	26.560
	SRR5643525	five period of Gastrodia elata	17.680
	SRR5643528	five period of Gastrodia elata	16.730
	SRR5643658	five period of Gastrodia elata	16.440
	SRR5643659	five period of Gastrodia elata	30.470
	SRR5643660	five period of Gastrodia elata	27.660
	SRR5643661	five period of Gastrodia elata	38.000
	SRR5643662	five period of Gastrodia elata	29.220
	SRR5643663	five period of Gastrodia elata	30.950
	SRR5643664	five period of Gastrodia elata	18.380
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	32.330
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	49.000
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	42.420
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	24.640
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	41.840
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	34.600
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	50.360
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	42.180
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	76.460
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	62.690
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	53.420
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	53.420
SRP279888	Gastro	Gastrodia elata tuber	29.60
	Juven	Juvenile tuber	15.52
	Mother_Gastro	Mother tuber of Gastrodia elata	19.79
	Mother_Juven	Mother tuber of Juvenile	9.70