Detail information of GWHGAAEX000453/evm.TU.scaffold_1.154


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672124806|ref|XP_008785801.1|8.89E-65PREDICTED: salt tolerance protein-like isoform X1 [Phoenix dactylifera]
Swissprottr|C0SVM5|BBX19_ARATH2.00E-63B-box zinc finger protein 19 {ECO:0000303|PubMed:19920209}
trEMBLtr|B7ZWS9|B7ZWS9_MAIZE2.00E-62Uncharacterized protein {ECO:0000313|EMBL:ACL52378.1, ECO:0000313|EnsemblPlants:GRMZM2G422644_P01}
TAIRAT2G213208.00E-55B-box zinc finger family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000863777726404117+
Transcript Sequence

Network for GWHGAAEX000453

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module6

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00643.23zf-B_box4451.20E-06
PF00643.23zf-B_box52857.30E-06
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyDBB

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0008270Molecular Functionzinc ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms23.590
SRR2545915Juvenile tuber13.640
SRP108465SRR5643513five period of Gastrodia elata16.810
SRR5643514five period of Gastrodia elata25.220
SRR5643515five period of Gastrodia elata11.920
SRR5643524five period of Gastrodia elata20.880
SRR5643525five period of Gastrodia elata74.300
SRR5643528five period of Gastrodia elata55.340
SRR5643658five period of Gastrodia elata77.050
SRR5643659five period of Gastrodia elata10.530
SRR5643660five period of Gastrodia elata11.430
SRR5643661five period of Gastrodia elata13.550
SRR5643662five period of Gastrodia elata11.440
SRR5643663five period of Gastrodia elata16.520
SRR5643664five period of Gastrodia elata14.990
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_138.070
SRR6049655Rhizomagastrodiae_C368-T10_good_118.670
SRR6049656Rhizomagastrodiae_C368-T07_good_144.610
SRR6049657Rhizomagastrodiae_C368-T07_good_153.170
SRR6049658Rhizomagastrodiae_C368-T04_good_174.780
SRR6049659Rhizomagastrodiae_C368-T04_good_199.610
SRR6049660Rhizomagastrodiae_C368-T01_good_162.300
SRR6049661Rhizomagastrodiae_C368-T04_good_175.960
SRR6049662Rhizomagastrodiae_C368-T01_good_133.500
SRR6049663Rhizomagastrodiae_C368-T01_good_158.920
SRR6049664Rhizomagastrodiae_C368-T10_good_134.670
SRR6049665Rhizomagastrodiae_C368-T10_good_134.670
SRP279888GastroGastrodia elata tuber 20.28
JuvenJuvenile tuber21.12
Mother_GastroMother tuber of Gastrodia elata 52.73
Mother_JuvenMother tuber of Juvenile 22.31