Gene detail

Detail information of GWHGAAEX000454/CADD00041.1.gene

Functional Annotation

Database	Orthologs	E value	Annotation

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000008	6407980	6409888	+

Transcript Sequence
>GWHTAAEX000454 GTGAAGTGTGTCTTTAGCTTGCAAGATCCAAATATTTGCAAAGTAAAATTGAATTTTACATATTTTATAGTGATTTAGATATTTTAACTTAAACTTGGAAAAAAACTAAGTAATATAATTGAAATAATAAATAGTTGAAGAGCACACATAGATATTGTATTAATTCAGATCAATCTAAAATCTTGCCTTTACTCTTTAAAAGTTCATCACTTTTGAGATTTCACTCAAATATAATCTATCCTAATCACAAGCAAGTGGAGAACCCCTTACAATCCTCTCATTTGCACACTTTGATAGTAGTGCTACTGAGCAAAAACCCTCTTTATCAAAGTCATGCCTTTGCGGAGCACCAAGATCATTTCTACACTCGTTTTAACTTCGAAGCTGCTGAAATTATAATTCTCTCCAAATTTGTGACTTGATAGACTTTCCCCACACTCTTTTAAGCAATTTGCAAAAGTGGGCTATAAAAAAAAGAAAATGGAAATAACAAAATTAAAAACTTATAATATTGAGATGAAATCTCAAGATCCTAAGTGCTTAAACTTTGAGAGAGAAATTAAACAACCTTGGAGCGCCTTAGGAAGAGATTAGAAGCTTTTTTTAATCTTTTGAAATTGCTTTTGGCGTGATGAGAGACATAAGAAAGTGCATCTATTTGTAGGAGAGGATGAGGGGTTTCAAATAGAGCAAGAATACCAAAAGTGAATTTATTGGGAGCTTCCAAATTATCTTTTAGTGGAAATGATCTTACCAATTCTAGGTGGCACTGATTTTAAGTGCCCAAGAGCATCCCAATGCTCTGAGGGACGTGCTTGAGTGCACATCATCTCGCCTCGCCCCTGGGCACATTCACCTAGACGCTTATCCCACAACATAACATTTTGGGTCAGCCGAAAAGCCTTGGACGTTGTTTTAATCTATCTCAAACTTATGCCAGTCTTAATTTATAAATAACATTATAAATACAATAAAATAAAGTTAAAAAATCCAGGAAGACTTCAATAGAAGGTTGGACTCCAAATGGCTAAGTGGGTCCATTGCAGCTTGTCACACATGGTGAAGTGCTGAAGCTAAGCTCTCTTGACTAAGTTATATTCCTGAAATTTGTACTTAAATTTGTTTAGATGAAGATTATATTTTGCTATCGTCAAATTCAAATTTTAAGAGATATTATGAGATTAGAATTTTATGTTCAACATAGTCCCCAAACCTTTTGATATTTTTAGATGTGCTCAAGGGTTGTTTAGTTCACTTTATCTCCATATAATGCTATGTTATCTCTTAATAATAGAGAAATAAGTCATTTGTTTCAAAGATGTGTCTTTTGAAGCTGAAATTATTTACAAATTTGCCATCAAATAATGTTATTCAAATAGCAGCCAGGTTACCCAGGTATTCGGATAACGTAGAATAGATTAGCAAGTTCGCCTCCATCCCTGTTCTTTTTTTTTTTGCAAGTATAGGATGGTCTCCATGCATCTTCGTTCTTACATAGGGATTAGAGCTTTCCCACTCGACTTGACAGGTGCTGCTTTGTGCGGTTATTCTTTATTCGTGTTTTAACAATTGTTGTTACCAATACTGAAATAAAGAAGTAAACATCTAATAAACAAATAAAGCAGGGTGGTGGTGCCAGCGATGCTGCTACGGTTATGACTTCACTGGCCCCTTTAATGAGGATGCTGATAAATAGATTAGATGTAGTTTGTGAGATCATGATATATTAATATTGACTGCTTTATGATACCCAATTCATGTGGGAGCAATGGCCTCTTCTCCATTGAAGGTGACTGGAAGTGATTTTTTTATTATTATCATGGAATAATTTTCATGATATTGTGGATAATAATATATAGCGCATCAAACTTTATAATTTAGATGCTATATTTATGATATTAAAATGGTG

Network for GWHGAAEX000454

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module1

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	3.510
SRP064423	SRR2545915	Juvenile tuber	1.540
SRP108465	SRR5643513	five period of Gastrodia elata	2.240
	SRR5643514	five period of Gastrodia elata	3.780
	SRR5643515	five period of Gastrodia elata	3.520
	SRR5643524	five period of Gastrodia elata	3.380
	SRR5643525	five period of Gastrodia elata	6.500
	SRR5643528	five period of Gastrodia elata	5.650
	SRR5643658	five period of Gastrodia elata	10.720
	SRR5643659	five period of Gastrodia elata	1.390
	SRR5643660	five period of Gastrodia elata	1.520
	SRR5643661	five period of Gastrodia elata	2.110
	SRR5643662	five period of Gastrodia elata	1.370
	SRR5643663	five period of Gastrodia elata	2.580
	SRR5643664	five period of Gastrodia elata	1.750
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	2.580
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	2.640
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	1.900
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	2.940
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	3.170
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	4.760
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	2.760
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	2.730
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	1.110
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	2.210
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	2.250
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	2.250
SRP279888	Gastro	Gastrodia elata tuber	1.62
	Juven	Juvenile tuber	1.30
	Mother_Gastro	Mother tuber of Gastrodia elata	3.57
	Mother_Juven	Mother tuber of Juvenile	3.60