Detail information of GWHGAAEX000459/evm.TU.scaffold_1.165
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|262196399|ref|YP_003267608.1| | 1.00E-09 | serine/threonine protein kinase [Haliangium ochraceum DSM 14365] |
| nr | gi|743818215|ref|XP_010931161.1| | 0 | PREDICTED: probable serine/threonine-protein kinase At5g41260 [Elaeis guineensis] |
| Swissprot | tr|Q9FHD7|Y5126_ARATH | 0 | Probable serine/threonine-protein kinase At5g41260 |
| trEMBL | tr|D7THE2|D7THE2_VITVI | 0 | Putative uncharacterized protein {ECO:0000313|EMBL:CBI30458.3} |
| TAIR | AT5G59010 | 0 | Protein kinase protein with tetratricopeptide repeat domain |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000008 | 7144715 | 7190106 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX000459
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF07714.16 | Pkinase_Tyr | 71 | 310 | 5.50E-24 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_RLCK-XII-1 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005515 | Molecular Function | protein binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 18.840 |
| SRR2545915 | Juvenile tuber | 14.490 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 14.740 |
| SRR5643514 | five period of Gastrodia elata | 13.710 | |
| SRR5643515 | five period of Gastrodia elata | 11.350 | |
| SRR5643524 | five period of Gastrodia elata | 12.700 | |
| SRR5643525 | five period of Gastrodia elata | 23.460 | |
| SRR5643528 | five period of Gastrodia elata | 15.820 | |
| SRR5643658 | five period of Gastrodia elata | 19.290 | |
| SRR5643659 | five period of Gastrodia elata | 6.570 | |
| SRR5643660 | five period of Gastrodia elata | 6.760 | |
| SRR5643661 | five period of Gastrodia elata | 5.560 | |
| SRR5643662 | five period of Gastrodia elata | 7.200 | |
| SRR5643663 | five period of Gastrodia elata | 8.870 | |
| SRR5643664 | five period of Gastrodia elata | 6.530 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 18.870 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 15.970 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 20.250 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 23.030 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 19.380 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 19.890 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 20.540 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 19.650 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 23.820 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 21.150 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 21.700 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 21.700 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 12.68 |
| Juven | Juvenile tuber | 15.16 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 9.87 | |
| Mother_Juven | Mother tuber of Juvenile | 14.90 |