Gene detail

Detail information of GWHGAAEX000461/evm.TU.scaffold_1.169

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG0724	1.00E-88	Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains
nr	gi\|672124087\|ref\|XP_008785419.1\|	1.24E-123	PREDICTED: transcription factor DIVARICATA isoform X1 [Phoenix dactylifera]
Swissprot	tr\|Q8S9H7\|DIV_ANTMA	5.00E-91	Transcription factor DIVARICATA
trEMBL	tr\|B9GIV0\|B9GIV0_POPTR	2.00E-100	Uncharacterized protein {ECO:0000313\|EMBL:EEE84632.2}
TAIR	AT2G38090	1.00E-88	Duplicated homeodomain-like superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000008	7303913	7305968	+

Transcript Sequence
>GWHTAAEX000461 CCGTGATTGGCCAGAAGAGTGCAATATTAACGAAAGATCTTGGACGGATCGCGTAAACCCCTCATTAAGTGTTGCTTTAAGCTCTTTTAATCAACTTCTTAAGAACTAATTCTTCCTTAAACCTCCATGCTTTGCCTGATTCTCTTTTTCTTATATATAAACGAGGATTTTCTAGAGGCCGAATGGCCACTACCGAGACGCTCCACTAAGGTCCAATCACCTTCCACCATCTTTCCCACTTTTCTTTGGATCTCAAACAGCAGGAAAAATGAGGGAGCAGAGAGGAGTTTTGAATCCTCATGCTTCCTCTCCAGAGCTTTGATTCCTCTTCTTGAAGTTCGAATCTCAAAGGATCTGGTTTTGTATTTCTAGGGTTCTGTTTTAGTTTTTCTCCAAAACTCCCATTCCGCTTATAGCTAGCTGTGTCCGCATTGATCTTCTCATTGATGCGCTTCTCTAGAACCTGAATTTTTGGAGCCTGAGTGGCAAGTATGCATTTAGATTGGGTGAAAAAAGTTGGTGGGGTTATTTGAAGATCACGAATTCTTGGATGGAAGTTCTTGCTCCTGCTTATTTTTCAAATTCCAGTTGGATTCTCGGGGAGAAAAAGAGCGGTAACTGGACTCAGCAGGAGAACAAGCTATTCGAGAATGCACTCGCGCACTTCGATAGAGATACGCCGGATCGATGGGTAAGGGTAGCTGGGATGATTCCTGGAAAGACAGTAGAGGATGTCATGTCCCATTACCATGACTTGGAAGAAGATGTGAGCTATATAGAAGCCGGCCTCATCCCTTTCCCCGGCTACAGCTCTTCATCCTTCACTTTGGATTGGGAAAGCGGCCATAGCTTCGACGTTATAAATCAGCCATACTCAATCTGTGTGAAGAGATCAGGAAGCCGATTTGTGGACCATGAGAGGAAAAAGGGCGTTCCTTGGACTGAAGAAGAACACAAGAGGTTTCTAATGGGACTTAAAAAATATGGCAAAGGGGATTGGAGGAACATTTCCCGCAATTTTGTTGTTACTAGGACTCCCACTCAAGTTGCAAGCCATGCTCAGAAATATTTCATCAGGCTTAATTCCGGTTCCAAAGACAAGAGGAGAGCAAGCATACATGACATTACAATGGTTAATATAGAAGATGGCAAATCTCCTTCTCCATCTCAGCCGTCGGTTGTTACCATGTCTTCTTGTTCAGCTAGCACCTTTGAAAATTTCTCTGGGGTAGTCGATTCAAAGCATCCTACAGAGCCGGCTAGTGTGTTTAATGTCTCAACCGACAATGCCCAATTAGGTCATCCACCTTACAGCATCCAACCATATGAATTGAAACTCCATGGTCAGAGCTCTATTATTGGAACCCATGGTGTGTTATTTTAGATGCTTTTCTTCAAGGCTGTTGTTGATAACTAGTGTAGAACTTGCTTGGAAGACTTCCTTTGCTCTGTTAATCTCCATTGGAGATTCAAGTATTAGGGTTTTTGGTATAAACATTTTAGGGAGAATTCAGATGTTTGTGCTTTCATAACACACTGTTCTGGAGATTTAGCCTAGGACTGATAATGAACGTTTTGAGGAACTCATTTCATGGTTTTGTAAGTCTTCTCAATTAAGTTATACGTGCTTTTTGTCTTTGTAGGTGTATATGTCTTCATTACAGAACACAGTAATGCATCATCATGGATTCAGATCTATCATTGTTAACTTAATTTAAGCCCTTAGTTGATTGATGGTTGTGGTTTTACAAAAGGTTCTTTGGCACTCTCTTGCAACTCCACACCACATTTTCTATCTATACAATAAAACCAATTATTATCTTTCCTATGATGTTTTTTTAGGCATGC

Network for GWHGAAEX000461

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00249.30	Myb_DNA-binding	22	69	3.50E-08
PF00249.30	Myb_DNA-binding	129	173	4.30E-13

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	MYB

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0003677	Molecular Function	DNA binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	24.040
SRP064423	SRR2545915	Juvenile tuber	20.980
SRP108465	SRR5643513	five period of Gastrodia elata	58.020
	SRR5643514	five period of Gastrodia elata	31.250
	SRR5643515	five period of Gastrodia elata	40.560
	SRR5643524	five period of Gastrodia elata	29.320
	SRR5643525	five period of Gastrodia elata	45.360
	SRR5643528	five period of Gastrodia elata	24.420
	SRR5643658	five period of Gastrodia elata	28.130
	SRR5643659	five period of Gastrodia elata	28.140
	SRR5643660	five period of Gastrodia elata	22.550
	SRR5643661	five period of Gastrodia elata	33.260
	SRR5643662	five period of Gastrodia elata	23.780
	SRR5643663	five period of Gastrodia elata	23.610
	SRR5643664	five period of Gastrodia elata	22.790
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	30.990
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	37.530
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	33.530
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	27.100
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	24.610
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	19.150
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	19.920
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	25.010
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	33.850
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	26.150
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	45.960
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	45.960
SRP279888	Gastro	Gastrodia elata tuber	18.53
	Juven	Juvenile tuber	46.49
	Mother_Gastro	Mother tuber of Gastrodia elata	29.86
	Mother_Juven	Mother tuber of Juvenile	26.58