Detail information of GWHGAAEX000464/evm.TU.scaffold_1.176


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG21011.00E-20Intermediate filament-like protein, sorting nexins, and related proteins containing PX (PhoX) domain(s)
nrgi|721635288|ref|XP_010230988.1|3.20E-63PREDICTED: uncharacterized protein LOC100826848 isoform X2 [Brachypodium distachyon]
trEMBLtr|I1HG19|I1HG19_BRADI1.00E-63Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI2G15390.1}
TAIRAT1G152401.00E-20Phox-associated domain;Phox-like;Sorting nexin, C-terminal

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000876904777710174+
Transcript Sequence

Network for GWHGAAEX000464

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08628.11Nexin_C11149.60E-21
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms23.160
SRR2545915Juvenile tuber28.250
SRP108465SRR5643513five period of Gastrodia elata22.790
SRR5643514five period of Gastrodia elata21.430
SRR5643515five period of Gastrodia elata21.560
SRR5643524five period of Gastrodia elata21.170
SRR5643525five period of Gastrodia elata21.830
SRR5643528five period of Gastrodia elata18.070
SRR5643658five period of Gastrodia elata28.250
SRR5643659five period of Gastrodia elata16.100
SRR5643660five period of Gastrodia elata17.350
SRR5643661five period of Gastrodia elata15.370
SRR5643662five period of Gastrodia elata14.200
SRR5643663five period of Gastrodia elata17.770
SRR5643664five period of Gastrodia elata14.260
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_123.070
SRR6049655Rhizomagastrodiae_C368-T10_good_130.630
SRR6049656Rhizomagastrodiae_C368-T07_good_120.120
SRR6049657Rhizomagastrodiae_C368-T07_good_127.000
SRR6049658Rhizomagastrodiae_C368-T04_good_124.150
SRR6049659Rhizomagastrodiae_C368-T04_good_124.380
SRR6049660Rhizomagastrodiae_C368-T01_good_124.430
SRR6049661Rhizomagastrodiae_C368-T04_good_122.610
SRR6049662Rhizomagastrodiae_C368-T01_good_118.130
SRR6049663Rhizomagastrodiae_C368-T01_good_116.700
SRR6049664Rhizomagastrodiae_C368-T10_good_121.000
SRR6049665Rhizomagastrodiae_C368-T10_good_121.000
SRP279888GastroGastrodia elata tuber 26.78
JuvenJuvenile tuber32.73
Mother_GastroMother tuber of Gastrodia elata 26.22
Mother_JuvenMother tuber of Juvenile 26.52