Detail information of GWHGAAEX000496/evm.TU.scaffold_1.218


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695054131|ref|XP_009415186.1|2.45E-51PREDICTED: putative protein TPRXL [Musa acuminata subsp. malaccensis]
trEMBLtr|M0THB3|M0THB3_MUSAM2.00E-48Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P13760_001}
TAIRAT1G282802.00E-35VQ motif-containing protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000899259389930362-
Transcript Sequence

Network for GWHGAAEX000496

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05678.13VQ861081.00E-08
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms6.930
SRR2545915Juvenile tuber10.370
SRP108465SRR5643513five period of Gastrodia elata14.030
SRR5643514five period of Gastrodia elata12.820
SRR5643515five period of Gastrodia elata10.190
SRR5643524five period of Gastrodia elata11.240
SRR5643525five period of Gastrodia elata49.330
SRR5643528five period of Gastrodia elata53.100
SRR5643658five period of Gastrodia elata87.880
SRR5643659five period of Gastrodia elata8.030
SRR5643660five period of Gastrodia elata5.600
SRR5643661five period of Gastrodia elata6.670
SRR5643662five period of Gastrodia elata6.800
SRR5643663five period of Gastrodia elata7.520
SRR5643664five period of Gastrodia elata18.710
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_112.760
SRR6049655Rhizomagastrodiae_C368-T10_good_130.280
SRR6049656Rhizomagastrodiae_C368-T07_good_113.050
SRR6049657Rhizomagastrodiae_C368-T07_good_110.340
SRR6049658Rhizomagastrodiae_C368-T04_good_18.600
SRR6049659Rhizomagastrodiae_C368-T04_good_17.810
SRR6049660Rhizomagastrodiae_C368-T01_good_110.860
SRR6049661Rhizomagastrodiae_C368-T04_good_19.470
SRR6049662Rhizomagastrodiae_C368-T01_good_111.890
SRR6049663Rhizomagastrodiae_C368-T01_good_111.950
SRR6049664Rhizomagastrodiae_C368-T10_good_114.100
SRR6049665Rhizomagastrodiae_C368-T10_good_114.100
SRP279888GastroGastrodia elata tuber 6.76
JuvenJuvenile tuber5.88
Mother_GastroMother tuber of Gastrodia elata 21.05
Mother_JuvenMother tuber of Juvenile 28.66