Detail information of GWHGAAEX000504/evm.TU.scaffold_1.226


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|258543565|ref|YP_003188998.1|5.00E-41heme exporter ATP-binding protein A [Acetobacter pasteurianus IFO 3283-01]
KOGKOG00592.00E-124Lipid exporter ABCA1 and related proteins, ABC superfamily
nrgi|695063427|ref|XP_009420215.1|2.68E-131PREDICTED: ABC transporter I family member 1 [Musa acuminata subsp. malaccensis]
Swissprottr|Q9C8T1|AB1I_ARATH7.00E-125ABC transporter I family member 1
trEMBLtr|B2ZAR0|B2ZAR0_GOSRA2.00E-128Putative ABC transporter {ECO:0000313|EMBL:ACD56627.1}
TAIRAT1G632702.00E-124non-intrinsic ABC protein 10

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000081009516910096304+
Transcript Sequence

Network for GWHGAAEX000504

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00005.26ABC_tran261682.30E-26
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0017004Biological Processcytochrome complex assembly
GO:0022857Molecular Functiontransmembrane transporter activity
GO:0016887Molecular FunctionATPase activity
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms39.190
SRR2545915Juvenile tuber34.270
SRP108465SRR5643513five period of Gastrodia elata47.930
SRR5643514five period of Gastrodia elata47.280
SRR5643515five period of Gastrodia elata49.620
SRR5643524five period of Gastrodia elata44.430
SRR5643525five period of Gastrodia elata79.420
SRR5643528five period of Gastrodia elata90.240
SRR5643658five period of Gastrodia elata62.550
SRR5643659five period of Gastrodia elata68.160
SRR5643660five period of Gastrodia elata69.330
SRR5643661five period of Gastrodia elata59.870
SRR5643662five period of Gastrodia elata83.390
SRR5643663five period of Gastrodia elata69.380
SRR5643664five period of Gastrodia elata60.920
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_142.310
SRR6049655Rhizomagastrodiae_C368-T10_good_137.800
SRR6049656Rhizomagastrodiae_C368-T07_good_142.790
SRR6049657Rhizomagastrodiae_C368-T07_good_135.820
SRR6049658Rhizomagastrodiae_C368-T04_good_130.500
SRR6049659Rhizomagastrodiae_C368-T04_good_132.090
SRR6049660Rhizomagastrodiae_C368-T01_good_138.910
SRR6049661Rhizomagastrodiae_C368-T04_good_130.940
SRR6049662Rhizomagastrodiae_C368-T01_good_144.210
SRR6049663Rhizomagastrodiae_C368-T01_good_140.170
SRR6049664Rhizomagastrodiae_C368-T10_good_154.700
SRR6049665Rhizomagastrodiae_C368-T10_good_154.700
SRP279888GastroGastrodia elata tuber 47.11
JuvenJuvenile tuber41.72
Mother_GastroMother tuber of Gastrodia elata 63.86
Mother_JuvenMother tuber of Juvenile 61.19