Detail information of GWHGAAEX000512/evm.TU.scaffold_1.238


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695062249|ref|XP_009419587.1|2.38E-180PREDICTED: CRS2-associated factor 2, mitochondrial isoform X1 [Musa acuminata subsp. malaccensis]
Swissprottr|Q0J7J7|CAF2M_ORYSJ2.00E-158CRS2-associated factor 2, mitochondrial (Precursor)
trEMBLtr|M0U4S8|M0U4S8_MUSAM2.00E-180Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P30210_001}
TAIRAT5G548903.00E-154RNA-binding CRS1 / YhbY (CRM) domain-containing protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000081033882810369536-
Transcript Sequence

Network for GWHGAAEX000512

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01985.20CRS1_YhbY1522372.00E-19
PF01985.20CRS1_YhbY2733554.20E-11
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0003723Molecular FunctionRNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms3.940
SRR2545915Juvenile tuber3.480
SRP108465SRR5643513five period of Gastrodia elata2.850
SRR5643514five period of Gastrodia elata3.960
SRR5643515five period of Gastrodia elata3.490
SRR5643524five period of Gastrodia elata3.430
SRR5643525five period of Gastrodia elata3.920
SRR5643528five period of Gastrodia elata5.670
SRR5643658five period of Gastrodia elata3.530
SRR5643659five period of Gastrodia elata3.980
SRR5643660five period of Gastrodia elata4.850
SRR5643661five period of Gastrodia elata4.490
SRR5643662five period of Gastrodia elata5.010
SRR5643663five period of Gastrodia elata4.930
SRR5643664five period of Gastrodia elata4.640
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_12.800
SRR6049655Rhizomagastrodiae_C368-T10_good_13.060
SRR6049656Rhizomagastrodiae_C368-T07_good_12.620
SRR6049657Rhizomagastrodiae_C368-T07_good_13.320
SRR6049658Rhizomagastrodiae_C368-T04_good_12.510
SRR6049659Rhizomagastrodiae_C368-T04_good_13.360
SRR6049660Rhizomagastrodiae_C368-T01_good_11.820
SRR6049661Rhizomagastrodiae_C368-T04_good_12.020
SRR6049662Rhizomagastrodiae_C368-T01_good_12.630
SRR6049663Rhizomagastrodiae_C368-T01_good_12.100
SRR6049664Rhizomagastrodiae_C368-T10_good_13.270
SRR6049665Rhizomagastrodiae_C368-T10_good_13.270
SRP279888GastroGastrodia elata tuber 4.60
JuvenJuvenile tuber5.59
Mother_GastroMother tuber of Gastrodia elata 4.82
Mother_JuvenMother tuber of Juvenile 6.35