Detail information of GWHGAAEX000513/evm.TU.scaffold_1.239


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG08583.00E-151Predicted membrane protein
nrgi|698441921|ref|XP_009762340.1|8.20E-160PREDICTED: derlin-2.2 [Nicotiana sylvestris]
Swissprottr|Q4G2J3|DER22_MAIZE1.00E-160Derlin-2.2
trEMBLtr|I3STV7|I3STV7_MEDTR3.00E-159Uncharacterized protein {ECO:0000313|EMBL:AFK43699.1}
TAIRAT4G048603.00E-151DERLIN-2.2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000081037022510373268+
Transcript Sequence

Network for GWHGAAEX000513

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04511.14DER1122117.70E-59
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13989DERL2_3 Protein processing in endoplasmic reticulum map04141

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms179.460
SRR2545915Juvenile tuber234.140
SRP108465SRR5643513five period of Gastrodia elata186.220
SRR5643514five period of Gastrodia elata156.570
SRR5643515five period of Gastrodia elata188.940
SRR5643524five period of Gastrodia elata161.980
SRR5643525five period of Gastrodia elata251.960
SRR5643528five period of Gastrodia elata202.990
SRR5643658five period of Gastrodia elata235.770
SRR5643659five period of Gastrodia elata231.220
SRR5643660five period of Gastrodia elata247.170
SRR5643661five period of Gastrodia elata253.140
SRR5643662five period of Gastrodia elata238.560
SRR5643663five period of Gastrodia elata219.340
SRR5643664five period of Gastrodia elata249.190
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1215.850
SRR6049655Rhizomagastrodiae_C368-T10_good_1195.680
SRR6049656Rhizomagastrodiae_C368-T07_good_1209.640
SRR6049657Rhizomagastrodiae_C368-T07_good_1198.950
SRR6049658Rhizomagastrodiae_C368-T04_good_1240.830
SRR6049659Rhizomagastrodiae_C368-T04_good_1226.920
SRR6049660Rhizomagastrodiae_C368-T01_good_1185.160
SRR6049661Rhizomagastrodiae_C368-T04_good_1192.390
SRR6049662Rhizomagastrodiae_C368-T01_good_1175.320
SRR6049663Rhizomagastrodiae_C368-T01_good_1180.960
SRR6049664Rhizomagastrodiae_C368-T10_good_1218.240
SRR6049665Rhizomagastrodiae_C368-T10_good_1218.240
SRP279888GastroGastrodia elata tuber 282.01
JuvenJuvenile tuber236.86
Mother_GastroMother tuber of Gastrodia elata 255.18
Mother_JuvenMother tuber of Juvenile 223.83