Gene detail

Detail information of GWHGAAEX000518/evm.TU.scaffold_1.247

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|257093903\|ref\|YP_003167544.1\|	5.00E-26	TIR protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1]
KOG	KOG2029	0	Uncharacterized conserved protein
nr	gi\|743772667\|ref\|XP_010916648.1\|	0	PREDICTED: uncharacterized protein LOC105041383 [Elaeis guineensis]
trEMBL	tr\|F6H018\|F6H018_VITVI	0	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB45868.1}
TAIR	AT4G34310	0	alpha/beta-Hydrolases superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000008	10516109	10569118	+

Transcript Sequence
>GWHTAAEX000518 AAAAAACTGCCCAAACAAAAAAGAATACGATACATTCCCTAAATTCCCCGTCAAAAGTCAGTATCCAAATTCAACACGGGAAAAGAACCCGGCGATTAAGTTCACAAATAGAGCTCCTTTCTCCCAATGCGCCGCCTGATCACGAGGCCGGGCCGCCCATCGTTGCCGTTCTCTCATGTCAACTCTAAAACAAGCGACTATCTCAGATCTCCGCTCCCCGCTCGCCAAGACGCCATCAATCCGTCTCCGCTCTCCACCTCGTCCTCCTCTTCAGACAATTTCCGTCCGAAATCCATCTATTTCTATACCGCAGTTGCCGGTGCTTTAACATCCGGAGTCGTCTTGTTTTCATATTACCGCAACTCTCCTCCATTAACCGATGATCCAACCCAATCAACGTTCAGCCAACTCTACGCTGACCTCGAGGAAACCCTACAAAAGTGCCGTGGCTCCATCCATCGAGTGATGAACCAGATGGTACAAACCGGCGCCGCCGCATCAGTTCTATGGAAATCGCTGGCGTCTGTCCTGTCATCGGCCAATCAGGAGGTACGATCAGGGTTCGAGTTGCGCGTGGCAGCGCTTCTGGCCGATATTGCTGCCGCCAGTGAGGCTCGCCGAGCCGCCATCGTAGGAGCTGGCGGCGGAGCTGTTGTGGATTGGCTGCTGGAGACTGTTGCTGCCCCCCTGAATGGAGGGGATCGTGGAGGGACGCAGGCTGAGTCTGCAAGGGCTCTAGCTTATTTGATCGCTGACCCATATGTGTGCGAGAAGGTGTTAGGGCGGCCAAATGCTATACCGTATCTCCTCAGATTCATCTTCTCTTTCCAGCCCAAACGGCAGAAAAAGCAACTTAAATATGCATCATTTGAGAGAGCTGAAATCTGGAGGGGGAAAAGCATGCTTGTTGCTGCTTTGATGGACATAGTTACTTCCAACTGTGATAATATAGATAATTCAACCTTTAGACCATCATTACCTGGAGATGCAGATTTAAGGGATATCTCTATAGCTCTTGAAGTTATTGAGGAGGGTGGACTTCATTTTGATGATAATAGTGGAAATGATGATATTGATGATAGCAATCCCAGAATCAAGGGAATTGGGATCAAGATTCTCGGTGGTACATCTATTTTGGGATTCTCAAGAACAGATGAGTTCTTGAGTTTGGAAGCAACTAATGGTCATTTGGGTTCATCCGTTTTTCAAACTGGAAATGCAGTGCTTCAGGAAAATACTAGAAATTTAAAATTGGGTACTGCACTTTCCTCAGCAACTCCTGGTCTCTGGGATGATCTGCAGCGGGAGCATGTTGCTGTACCTTTTGCTGCATGGGCTCTTGCTAATTGGGCTTTGGCTTCTCAGTATAATCGTTCCCACATTCAAGAACTTGATAGAGATGGGCATGCTGTTATGACTGCTCTGACAGCAGCAGAAAGGACTGTGAAATGGCATGGAAGCTTGATAGCTTGTGCACTCTTGGCTGACTATAACTTGCCCTTGACTGTTGTTTCTGTTCGAGAATGGAGTGCTAGTCTTCTTTCTACTGCTTTTCAGGCTAGTAAAGTTGATGATGATTCCTTAGCACTAATAGCTTTGTCTGCATTACTTGCATCTGTTGACAGGAGTAATGAGGCAAAAATCTTTGTGAATGAGAGTGGCCTTGATATGTTGAGAGAAATAGTAAGGAGGGTTGGAAAAAATAAGCATTTGCAAGAAACATCAGTGAGGGTCTTGGAATTGCTCTATGATGGAAATTTGCATTTATCTCTTGATGAAAGCAAGAAGTGGTCTGGATTTCTTCTTCGGTGGGTTTTCCATGAATTCTCTTCTGTGAGCACACGTTCATCAGCAATAAAAATACTGGCACGTATCCTTGAAGACCATGGGCCTGATTCCATACCAATTTCTCAGGGATGGTTAGCTGTAATACTCAGTGAAATGCTTGGAGCCAGTAAGACGTCATCTTTGAAAGGAAGCAATATGACCAAGTCTGATAAAATGAAGACACGAATTGAACAGTCCAATGTTCTTTCAGCTACTCAGGTGATGAATCAGTTAGCTACTGCTGTTATCAAACAGTCAGAAATTAATATGGAAACTGAATCAGATTCTACTAATCAGCTTCCTCTTTCTGATTTTCTTACTCTTGAACCATTTGCTTCACTATCCAAAAATCAGAAAGGAAATAATCAACAAAAGCTTGACGCTGCTGATTTAGCTTTTGCCACATTAAAGGCTATCAAAATATTAACAGAGCTTTGTTCTGAGGATTCTGCTTACCAAAAAAAAATAATTGATTTTGGAATCCTTTGCCTACTTAAGCGCCTACTTGTTGGAGATGATTATGAAAAACATGCAGCTAATGAAACATATGATGCTTCAAGGGCAATGGAATCACAGGACCGATCCTCAACAATTACTGTTGATCATCCAGCCTTGAATTCTAATGATTCTTCTAGCATCCGTGTTCCTCCTGCAGCACATATACGCAGACATGCTGCTCAGCTTCTCACAGTACTCTCTCTTCTTCCAACTGTGAAAAGCTCCATTGAAGAAGATGAGGTTTTATGCCAATGGCTTGATAGTTGTGCAAGTCAAAAAAATTCTTGTTGCACTGATCCTAAAACTCAGAGCTATGCAAGGGCAACACTTCTGAACGTATTTTGCTCTGGAAAACAATCAGTTATGAATACAGAGGATGGCCAATCAACATGTGCTCAGTACAAAGATATGCTATTTTTGATTAGTTCCAGTCTTTCACATTGGAAATGCTCCAAAGTGAGTGATATGAATGATTCACTCAACAAAGAACTTAATTTGCCTATTGCTTCTTCAAGTGGTGATGGTGATGGATATAGTTTAAATCCGAATGGTGACACTACAAATGTGGTTTCACAAGGGGAGTCCCCTTTGATAGATGTTGTCTTTGTTCATGGCTTACGTGGTGGGCCATTTAAGTCTTGGCGTATGGCAGATGACAAGTCCTCAAATACTAGTAAAGCTGGGCTGGTGGAACATATAGATCGTGAGGCTGGGAAAGAGGGAACATTTTGGCCAAGCGAATGGTTGTCAACTGATTTTCCACAGGCACGCCTTTTTACTCTAAGATATAAGACAAAACTAACTCAATGGACGGGAGCTAGCTTACCTCTTCAGGAAGTTAGCTCAATTTTGCTAGATAAGCTGTTGGCTGCAGGGATAGGAGATCGTCCTATTGTTTTTGTGACTCATAGCATGGGAGGCCTTGTTGTGAAGCAGATGCTTTATCAAGCCAAGCTTAATAAACTCAACAACTTTCTTGATAACACGTCTGGAATTATTTTCTATAGTTGCCCGCATTTTGGCAGCAAACTTGCTGATATGCCTTGGCGGATGGGCCTGATATTACGCCCAGCACCCACGATTGGAGAACTTAGAAGCGGATCCCCTAGGCTGGTAGAGCTGAATGACTTTATTCGTCACCTTCACAAAAGAGGAGATCTTGATATTCTTAGTTTCAGTGAGACCCAAGTTACCCCGATTGTTGAAGGTTATGGTGGATGGGCCTTGCGGATGGAAATTGTACCAATTGAATCTGCCTATCCGGGGTTTGGTGAACTAGTTGTGTTGGATGCAACCGATCATGTTAACTCTTGCAAGCCTGTCAGCCGAACCGACCCTGCTTATGCTGAAACACTTGAGTTCTTGAAGAAGTTAAAAACTCGCATTACTTAGCTTTGCTAATCTATCTAATACCTCCTTCAGACCAGATATGACATGGTGGATATTCTCCTAGTAATCTTGTGTATGGTGGCGGCGGAGACACTTTTCAAAAGTTAGAGTTGTTATTTTGCAGGCCTGATTCAAGATTCCAAAGAATCTAGTTAGCAAAGCAAATTGATTGTATGAAAGCGCCAGATGTCATAAACAAAACTGCTATGCATGCTTGTATGGCCCGCAAAACAAATATTCTATACCAAGGAAATATGGAGTTTTATTGGTATGCTATTATTTCAATTATTTGTAGGTATTGTTTGTTTTTTCTGATGTTCATCACGATAACAAGTTGTATAAAATTGTTATCAAGGTATTAAAAAATAAATACTGTTGTTATACTTAGTATTTAGATTTCATCTCTTTTCTAGAATTTGGTGCCTAAGTTAATATGTAGTTTTTTGTAAAAATCAGATGTGAATTTTGTGGAAGAAGGTGACTATTCTTGAAACGTGATCCAAGGAATTAAATTTTTTTCTTAGGGAAAGCTGGACACTGATTGTTTTACTGCTACTACAATCTAGTATAAGGGAAGTCAATTTAGTTCAACTTGCAATTTTTAACAAATAAGAACATAACATGATTTATTTTCTAGACTAGTTACTTTTGTAGATTTAATATATGTATGAAGGTGAGAGGGTGCTGTTGCCCTTTTAGATGAAGTTCTCTCCTCAAAATGTCACCATCCTTTCACTAGGGTTGATGGATGAATGGATCAAATGTAAACCTAGCAAGTAACTTTTTGACTGCATCCCTTCCATCTGCCAAGTGGATGGTTGGTGAAACAATTTGAGGATTTAGTTTTTCATTTAAAGTGACAGTGACATCGAGGAATGCACAGTAATCCAAATAAAATATAAAATTTCTCTAAGTAGAGTGTTTATTCTTTATTTCTAAAGGAAGAGATGGGACCACAGCCCGCAATGAAGTGGGCTATGTTAAGAGTCATGGGAGAACTGTTTGGAGTAAGTTACTAGTGAAAATTTATTTAATTTATAGAACCTTTTGGGGTAGTGAAGAAGGAGAATTATCTGACTTGTATGGAGGTGTGGAAGCTGATGATATAGTGACTACAAAAAGTCTTTAGCACTTGAGAAAGTTAGGGAAAATGTTGCTTTTGTTGCTCTCAGCTATGCTGATTCTCTATTGCTTATAAATCTACCTTCTCTTTGTTAGATGGGGAGATTTGTGAAAGAAACACCTCCATAAGACTCTACTTTCCCATTATCAGAGCTATTCTAGGGCAACACTTCTGAATGTATTTACTCTGGATAACTGCAGTTATGACAACAGAGGGTTGCTAATCAACATTATAATGATTTATTTTTTAGTATTCCCGGTCTCTCACATTGGAAATATTCCAAAGGGAGTGCTATGAAAGATTTACTCAATAAAGAACTTATTTATCCGTTGCTTCTTCAAGTGGTGATAGTGATGCTTGCAATTTAAATTTGAACGGTGACCACTGCAAATTTTGTTAGGACAGATGTGGTTTCACAAGGGAAATTCCGATTGATAGATGTTGTCTTAGTTCATGGATTAAGTGGTGGGCCATTTAAGTCTTAGTGGATGACAA

Network for GWHGAAEX000518

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

>GWHPAAEX000518
MRRLITRPGRPSLPFSHVNSKTSDYLRSPLPARQDAINPSPLSTSSSSSDNFRPKSIYFYTAVAGALTSGVVLFSYYRNSPPLTDDPTQSTFSQLYADLEETLQKCRGSIHRVMNQMVQTGAAASVLWKSLASVLSSANQEVRSGFELRVAALLADIAAASEARRAAIVGAGGGAVVDWLLETVAAPLNGGDRGGTQAESARALAYLIADPYVCEKVLGRPNAIPYLLRFIFSFQPKRQKKQLKYASFERAEIWRGKSMLVAALMDIVTSNCDNIDNSTFRPSLPGDADLRDISIALEVIEEGGLHFDDNSGNDDIDDSNPRIKGIGIKILGGTSILGFSRTDEFLSLEATNGHLGSSVFQTGNAVLQENTRNLKLGTALSSATPGLWDDLQREHVAVPFAAWALANWALASQYNRSHIQELDRDGHAVMTALTAAERTVKWHGSLIACALLADYNLPLTVVSVREWSASLLSTAFQASKVDDDSLALIALSALLASVDRSNEAKIFVNESGLDMLREIVRRVGKNKHLQETSVRVLELLYDGNLHLSLDESKKWSGFLLRWVFHEFSSVSTRSSAIKILARILEDHGPDSIPISQGWLAVILSEMLGASKTSSLKGSNMTKSDKMKTRIEQSNVLSATQVMNQLATAVIKQSEINMETESDSTNQLPLSDFLTLEPFASLSKNQKGNNQQKLDAADLAFATLKAIKILTELCSEDSAYQKKIIDFGILCLLKRLLVGDDYEKHAANETYDASRAMESQDRSSTITVDHPALNSNDSSSIRVPPAAHIRRHAAQLLTVLSLLPTVKSSIEEDEVLCQWLDSCASQKNSCCTDPKTQSYARATLLNVFCSGKQSVMNTEDGQSTCAQYKDMLFLISSSLSHWKCSKVSDMNDSLNKELNLPIASSSGDGDGYSLNPNGDTTNVVSQGESPLIDVVFVHGLRGGPFKSWRMADDKSSNTSKAGLVEHIDREAGKEGTFWPSEWLSTDFPQARLFTLRYKTKLTQWTGASLPLQEVSSILLDKLLAAGIGDRPIVFVTHSMGGLVVKQMLYQAKLNKLNNFLDNTSGIIFYSCPHFGSKLADMPWRMGLILRPAPTIGELRSGSPRLVELNDFIRHLHKRGDLDILSFSETQVTPIVEGYGGWALRMEIVPIESAYPGFGELVVLDATDHVNSCKPVSRTDPAYAETLEFLKKLKTRIT

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	39.290
SRP064423	SRR2545915	Juvenile tuber	19.490
SRP108465	SRR5643513	five period of Gastrodia elata	10.740
	SRR5643514	five period of Gastrodia elata	9.960
	SRR5643515	five period of Gastrodia elata	13.470
	SRR5643524	five period of Gastrodia elata	11.420
	SRR5643525	five period of Gastrodia elata	24.410
	SRR5643528	five period of Gastrodia elata	31.490
	SRR5643658	five period of Gastrodia elata	22.690
	SRR5643659	five period of Gastrodia elata	14.120
	SRR5643660	five period of Gastrodia elata	15.350
	SRR5643661	five period of Gastrodia elata	13.270
	SRR5643662	five period of Gastrodia elata	15.370
	SRR5643663	five period of Gastrodia elata	15.360
	SRR5643664	five period of Gastrodia elata	16.180
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	17.270
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	12.080
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	14.000
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	22.220
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	30.650
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	38.890
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	22.830
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	27.620
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	11.710
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	18.330
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	10.420
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	10.420
SRP279888	Gastro	Gastrodia elata tuber	15.92
	Juven	Juvenile tuber	14.12
	Mother_Gastro	Mother tuber of Gastrodia elata	28.51
	Mother_Juven	Mother tuber of Juvenile	28.92