Gene detail

Detail information of GWHGAAEX000519/evm.TU.scaffold_1.248

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|148380141\|ref\|YP_001254682.1\|	6.00E-21	lipase/esterase [Clostridium botulinum A str. ATCC 3502]
KOG	KOG1515	1.00E-82	Arylacetamide deacetylase
nr	gi\|719969675\|ref\|XP_010269100.1\|	2.35E-103	PREDICTED: probable carboxylesterase 2 [Nelumbo nucifera]
Swissprot	tr\|Q9SX78\|CXE2_ARATH	4.00E-83	Probable carboxylesterase 2
trEMBL	tr\|A0A067K102\|A0A067K102_JATCU	8.00E-92	Uncharacterized protein {ECO:0000313\|EMBL:KDP25940.1}
TAIR	AT1G47480	1.00E-82	alpha/beta-Hydrolases superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000008	10573100	10574681	-

Transcript Sequence
>GWHTAAEX000519 TTGCGAATTCAATGCCGGAAGAAACCAAAAAAATGAGCTCATTGGCAGCCTCCTCCTCTCCTGACGACGTCGTCCTAGAGCTTCCCGGAATCATCCGGTTTTACAGGAGCGGCCGCGCCGATCGTCTCTTCCTCCTAGAACTCGTTCCCCCTTCCCTCAATCCCCTCACAGGCGTGCAATGCAGAGACGTCCTCATCAATCCCTCCACCGGCCTCTCTTCCCGCCTCTACCTCCCTCCTTTCCCTTTATCTTCCGAAAACAAGAAGATCCCCATCCTCGTCACCTTCCATGGCGGTGGATTCTGCATCCAGCGCGCTATCTCTTCCATCTACCACTCCTTCATCGATGCCCTAACCTTCAAATCCCGCATCCTCGCCATCTCGGTGGATTATCGCCTCGCTCCTGAGAGCCCTCTCCCTGCGGCCTACGATGACTGCTGGGAGGCTCTCCAATGGGTGCTCTCCAATGCCGATCCCTGGATCTCCGAGTTTGGGGATCTCGAGCGCGTCTTCTTGGAAGGGGAGAGCGCTGGCGCGAACATCGCGCATGATTTGGGGATGAGGCTGGGAAGAACTGAAGGGCGGAAGTTGGAGGGAATCGTGATGGCGCACCCCATGTTCTGGGGAAAAGCTAGGATTGGGGATGAAGTAAGCGGGAGAGTTCCGATGAAAGCCGAGGATGTGGATGCGCTGTGGTCAATTGTGTGTCCCGGGACGACGGGTCTTGACGACCCGAGGCTCAATCCTGTGGCCGACGGTGCGCCCAGCTTGGCGATTTTGGGGTGCCGGAGAGTTCTGGTGTGCCTTGCCGGAGTTGACGTGTTCAGGGAAAGAGGGATGGCTTATTATGAAGAGCTGAGGCGCTGCGGGCGGGAAGGAGAGGCTGAGTTATTTGATTCTGTTAGTGAAGAGCATGGCTTCTTCCTGTTTAATACTGACGGATCCAAGGCGGTGGAGTTCATGGATCGATTGGTTCGCTTCTTCAACACGCACAAGTAAGTGCATTAATCGATTGAAGAATGAATACTCCTCCAGTTCTTATTTCTTTTTTATCGAGTTCTTCAGTGGCATCTTGAAATTCCTTGTTTTGTGGTGATTTTTTTTACTTTTTGATTGGCACGACTCGAGCTTCAGTGGTTGCAAAGTCGAGCCTAAACTCGTCTGCTGTTGTGTGATTTTGTCATTTCAGATTATGTTGCAGCATGTTGATGCAGTTTGCTTCTTTTCTCTATTGCTGTTTGTTTGAATCTGTGAGTTCATTGAGGGCTTAGGATCATGTTCAGGCGATCATTCAGTTCAGTAGCGTTAAATTCTGTATTCGGCCAAACGCAAATTCTGTACAGTCACTATCAGATCCCACAATTTTCCGTATTCTCCCTTTGCTTAGTAATACTGTAATAATCGGAGACAAGCCAGGAAGCGCCCTGATTGCGCTCGCTAGGATGATCGGAGGCCTGGGACGCTCTCGCTGGGATGCCAATGTACGTCGGAGGTCCCTGCACTATCCATCGGATAGCTTTTTCTGGGAGTGCGCCGGAGGTCCCGGCGCGTCTTTCCGGCAAAGCCAATGACTTCGTCGCCAA

Network for GWHGAAEX000519

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module2

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF07859.12	Abhydrolase_3	89	304	2.40E-45

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0016787	Molecular Function	hydrolase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	1.940
SRP064423	SRR2545915	Juvenile tuber	1.900
SRP108465	SRR5643513	five period of Gastrodia elata	9.890
	SRR5643514	five period of Gastrodia elata	10.420
	SRR5643515	five period of Gastrodia elata	7.920
	SRR5643524	five period of Gastrodia elata	7.430
	SRR5643525	five period of Gastrodia elata	6.620
	SRR5643528	five period of Gastrodia elata	7.480
	SRR5643658	five period of Gastrodia elata	5.630
	SRR5643659	five period of Gastrodia elata	7.410
	SRR5643660	five period of Gastrodia elata	5.820
	SRR5643661	five period of Gastrodia elata	9.620
	SRR5643662	five period of Gastrodia elata	3.670
	SRR5643663	five period of Gastrodia elata	4.950
	SRR5643664	five period of Gastrodia elata	3.110
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	18.270
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	20.980
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	29.780
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	13.010
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	14.350
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	10.730
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	18.950
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	17.820
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	40.260
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	22.330
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	35.390
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	35.390
SRP279888	Gastro	Gastrodia elata tuber	2.94
	Juven	Juvenile tuber	2.10
	Mother_Gastro	Mother tuber of Gastrodia elata	5.44
	Mother_Juven	Mother tuber of Juvenile	2.97