Detail information of GWHGAAEX000520/evm.TU.scaffold_1.249


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743787412|ref|XP_010922411.1|1.67E-87PREDICTED: B3 domain-containing protein Os06g0194400 isoform X1 [Elaeis guineensis]
Swissprottr|Q69V36|Y6944_ORYSJ2.00E-72B3 domain-containing protein Os06g0194400
trEMBLtr|I1GZP0|I1GZP0_BRADI1.00E-75Uncharacterized protein {ECO:0000313|EnsemblPlants:BRADI1G45517.1}
TAIRAT3G19180_28.00E-59Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000081059618610604508+
Transcript Sequence

Network for GWHGAAEX000520

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02362.20B31412275.20E-09
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyB3

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms5.190
SRR2545915Juvenile tuber9.340
SRP108465SRR5643513five period of Gastrodia elata4.300
SRR5643514five period of Gastrodia elata4.240
SRR5643515five period of Gastrodia elata5.440
SRR5643524five period of Gastrodia elata5.900
SRR5643525five period of Gastrodia elata7.110
SRR5643528five period of Gastrodia elata23.540
SRR5643658five period of Gastrodia elata9.950
SRR5643659five period of Gastrodia elata8.750
SRR5643660five period of Gastrodia elata8.060
SRR5643661five period of Gastrodia elata7.840
SRR5643662five period of Gastrodia elata8.600
SRR5643663five period of Gastrodia elata7.500
SRR5643664five period of Gastrodia elata6.010
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_12.940
SRR6049655Rhizomagastrodiae_C368-T10_good_13.740
SRR6049656Rhizomagastrodiae_C368-T07_good_13.850
SRR6049657Rhizomagastrodiae_C368-T07_good_12.890
SRR6049658Rhizomagastrodiae_C368-T04_good_12.310
SRR6049659Rhizomagastrodiae_C368-T04_good_11.570
SRR6049660Rhizomagastrodiae_C368-T01_good_12.200
SRR6049661Rhizomagastrodiae_C368-T04_good_13.760
SRR6049662Rhizomagastrodiae_C368-T01_good_13.740
SRR6049663Rhizomagastrodiae_C368-T01_good_12.540
SRR6049664Rhizomagastrodiae_C368-T10_good_15.870
SRR6049665Rhizomagastrodiae_C368-T10_good_15.870
SRP279888GastroGastrodia elata tuber 14.04
JuvenJuvenile tuber3.72
Mother_GastroMother tuber of Gastrodia elata 23.87
Mother_JuvenMother tuber of Juvenile 9.24