Detail information of GWHGAAEX000523/evm.TU.scaffold_1.252


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|146298365|ref|YP_001192956.1|1.00E-11two component regulator [Flavobacterium johnsoniae UW101]
KOGKOG06190FOG: Leucine rich repeat
nrgi|695062051|ref|XP_009419483.1|0PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g67720 [Musa acuminata subsp. malaccensis]
Swissprottr|Q9ZQQ7|Y2144_ARATH3.00E-57Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440 (Precursor)
trEMBLtr|M0U4H2|M0U4H2_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P29150_001}
TAIRAT3G192300Leucine-rich repeat (LRR) family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000081067039310679779+
Transcript Sequence

Network for GWHGAAEX000523

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12819.6Malectin_like323541.60E-69
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2.730
SRR2545915Juvenile tuber1.560
SRP108465SRR5643513five period of Gastrodia elata1.930
SRR5643514five period of Gastrodia elata2.820
SRR5643515five period of Gastrodia elata1.760
SRR5643524five period of Gastrodia elata2.510
SRR5643525five period of Gastrodia elata3.740
SRR5643528five period of Gastrodia elata3.800
SRR5643658five period of Gastrodia elata4.110
SRR5643659five period of Gastrodia elata2.300
SRR5643660five period of Gastrodia elata2.950
SRR5643661five period of Gastrodia elata2.620
SRR5643662five period of Gastrodia elata2.010
SRR5643663five period of Gastrodia elata1.570
SRR5643664five period of Gastrodia elata2.320
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_14.710
SRR6049655Rhizomagastrodiae_C368-T10_good_13.040
SRR6049656Rhizomagastrodiae_C368-T07_good_15.930
SRR6049657Rhizomagastrodiae_C368-T07_good_14.210
SRR6049658Rhizomagastrodiae_C368-T04_good_15.640
SRR6049659Rhizomagastrodiae_C368-T04_good_14.930
SRR6049660Rhizomagastrodiae_C368-T01_good_15.000
SRR6049661Rhizomagastrodiae_C368-T04_good_15.030
SRR6049662Rhizomagastrodiae_C368-T01_good_16.340
SRR6049663Rhizomagastrodiae_C368-T01_good_15.090
SRR6049664Rhizomagastrodiae_C368-T10_good_14.360
SRR6049665Rhizomagastrodiae_C368-T10_good_14.360
SRP279888GastroGastrodia elata tuber 2.71
JuvenJuvenile tuber3.08
Mother_GastroMother tuber of Gastrodia elata 2.48
Mother_JuvenMother tuber of Juvenile 2.18