Detail information of GWHGAAEX000524/evm.TU.scaffold_1.253
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG3059 | 6.00E-124 | N-acetylglucosaminyltransferase complex, subunit PIG-C/GPI2, required for phosphatidylinositol biosynthesis |
| nr | gi|743854788|ref|XP_010941066.1| | 1.39E-154 | PREDICTED: putative phosphatidylinositol N-acetylglucosaminyltransferase subunit C [Elaeis guineensis] |
| trEMBL | tr|K3YUG4|K3YUG4_SETIT | 3.00E-151 | Uncharacterized protein {ECO:0000313|EnsemblPlants:Si017910m} |
| TAIR | AT2G34980 | 6.00E-124 | phosphatidylinositolglycan synthase family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000008 | 10693189 | 10706445 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX000524
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF06432.10 | GPI2 | 36 | 313 | 4.30E-76 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K03859 | PIGC, GPI2 | Metabolic pathways | map01100 |
| Glycosylphosphatidylinositol (GPI)-anchor biosynthesis | map00563 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006506 | Biological Process | GPI anchor biosynthetic process |
| GO:0017176 | Molecular Function | phosphatidylinositol N-acetylglucosaminyltransferase activity |
| GO:0016021 | Cellular Component | integral component of membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 20.590 |
| SRR2545915 | Juvenile tuber | 14.980 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 12.550 |
| SRR5643514 | five period of Gastrodia elata | 9.480 | |
| SRR5643515 | five period of Gastrodia elata | 14.370 | |
| SRR5643524 | five period of Gastrodia elata | 11.020 | |
| SRR5643525 | five period of Gastrodia elata | 22.900 | |
| SRR5643528 | five period of Gastrodia elata | 21.210 | |
| SRR5643658 | five period of Gastrodia elata | 22.820 | |
| SRR5643659 | five period of Gastrodia elata | 16.310 | |
| SRR5643660 | five period of Gastrodia elata | 13.450 | |
| SRR5643661 | five period of Gastrodia elata | 14.140 | |
| SRR5643662 | five period of Gastrodia elata | 16.550 | |
| SRR5643663 | five period of Gastrodia elata | 14.320 | |
| SRR5643664 | five period of Gastrodia elata | 15.930 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 16.390 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 17.310 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 16.110 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 12.230 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 15.310 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 16.880 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 15.030 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 16.510 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 15.110 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 17.220 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 18.660 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 18.660 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 17.00 |
| Juven | Juvenile tuber | 8.43 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 20.21 | |
| Mother_Juven | Mother tuber of Juvenile | 8.88 |