Detail information of GWHGAAEX000526/evm.TU.scaffold_1.257


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|225458639|ref|XP_002282817.1|4.63E-59PREDICTED: transcription factor HEC1 [Vitis vinifera]
Swissprottr|Q9SND4|HEC2_ARATH1.00E-47Transcription factor HEC2
trEMBLtr|E0CPU4|E0CPU4_VITVI2.00E-59Putative uncharacterized protein {ECO:0000313|EMBL:CBI19507.3}
TAIRAT3G503304.00E-47basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000081082408610825055-
Transcript Sequence

Network for GWHGAAEX000526

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00010.25HLH891293.00E-06
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilybHLH

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0046983Molecular Functionprotein dimerization activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms6.100
SRR2545915Juvenile tuber1.890
SRP108465SRR5643513five period of Gastrodia elata1.690
SRR5643514five period of Gastrodia elata2.460
SRR5643515five period of Gastrodia elata1.310
SRR5643524five period of Gastrodia elata2.400
SRR5643525five period of Gastrodia elata2.140
SRR5643528five period of Gastrodia elata0.660
SRR5643658five period of Gastrodia elata0.360
SRR5643659five period of Gastrodia elata0.690
SRR5643660five period of Gastrodia elata0.580
SRR5643661five period of Gastrodia elata0.250
SRR5643662five period of Gastrodia elata1.840
SRR5643663five period of Gastrodia elata0.320
SRR5643664five period of Gastrodia elata0.390
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11.670
SRR6049655Rhizomagastrodiae_C368-T10_good_15.200
SRR6049656Rhizomagastrodiae_C368-T07_good_11.600
SRR6049657Rhizomagastrodiae_C368-T07_good_12.720
SRR6049658Rhizomagastrodiae_C368-T04_good_11.370
SRR6049659Rhizomagastrodiae_C368-T04_good_11.240
SRR6049660Rhizomagastrodiae_C368-T01_good_11.980
SRR6049661Rhizomagastrodiae_C368-T04_good_11.740
SRR6049662Rhizomagastrodiae_C368-T01_good_12.540
SRR6049663Rhizomagastrodiae_C368-T01_good_12.180
SRR6049664Rhizomagastrodiae_C368-T10_good_13.060
SRR6049665Rhizomagastrodiae_C368-T10_good_13.060
SRP279888GastroGastrodia elata tuber 0.41
JuvenJuvenile tuber2.80
Mother_GastroMother tuber of Gastrodia elata 2.68
Mother_JuvenMother tuber of Juvenile 6.21