Detail information of GWHGAAEX000533/evm.TU.scaffold_1.266


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|264676779|ref|YP_003276685.1|2.00E-28molecular chaperone GroEL [Comamonas testosteroni CNB-2]
KOGKOG03566.00E-42Mitochondrial chaperonin, Cpn60/Hsp60p
nrgi|731402065|ref|XP_010654528.1|4.27E-50PREDICTED: chaperonin CPN60-like 2, mitochondrial [Vitis vinifera]
Swissprottr|Q43298|CH62_MAIZE2.00E-45Chaperonin CPN60-2, mitochondrial (Precursor)
trEMBLtr|F6HY21|F6HY21_VITVI1.00E-46Putative uncharacterized protein {ECO:0000313|EMBL:CCB59344.1}
TAIRAT3G138606.00E-42heat shock protein 60-3A

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000081119842711200038+
Transcript Sequence

Network for GWHGAAEX000533

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00118.23Cpn60_TCP1561221.60E-16
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K04077groEL, HSPD1 RNA degradation map03018
Longevity regulating pathway - wormmap04212

Gene Ontology

GO term OntologyName
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms13.240
SRR2545915Juvenile tuber18.220
SRP108465SRR5643513five period of Gastrodia elata14.230
SRR5643514five period of Gastrodia elata18.480
SRR5643515five period of Gastrodia elata14.860
SRR5643524five period of Gastrodia elata10.150
SRR5643525five period of Gastrodia elata0.580
SRR5643528five period of Gastrodia elata0.000
SRR5643658five period of Gastrodia elata1.790
SRR5643659five period of Gastrodia elata18.880
SRR5643660five period of Gastrodia elata15.920
SRR5643661five period of Gastrodia elata27.720
SRR5643662five period of Gastrodia elata14.860
SRR5643663five period of Gastrodia elata15.820
SRR5643664five period of Gastrodia elata12.530
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_115.820
SRR6049655Rhizomagastrodiae_C368-T10_good_121.640
SRR6049656Rhizomagastrodiae_C368-T07_good_129.280
SRR6049657Rhizomagastrodiae_C368-T07_good_115.290
SRR6049658Rhizomagastrodiae_C368-T04_good_126.970
SRR6049659Rhizomagastrodiae_C368-T04_good_117.580
SRR6049660Rhizomagastrodiae_C368-T01_good_128.270
SRR6049661Rhizomagastrodiae_C368-T04_good_119.240
SRR6049662Rhizomagastrodiae_C368-T01_good_138.610
SRR6049663Rhizomagastrodiae_C368-T01_good_133.740
SRR6049664Rhizomagastrodiae_C368-T10_good_121.310
SRR6049665Rhizomagastrodiae_C368-T10_good_121.310
SRP279888GastroGastrodia elata tuber 34.00
JuvenJuvenile tuber46.68
Mother_GastroMother tuber of Gastrodia elata 8.49
Mother_JuvenMother tuber of Juvenile 14.36