Gene detail

Detail information of GWHGAAEX000539/evm.TU.scaffold_1.275

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|262197785\|ref\|YP_003268994.1\|	5.00E-55	metallophosphoesterase [Haliangium ochraceum DSM 14365]
KOG	KOG0374	1.00E-148	Serine/threonine specific protein phosphatase PP1, catalytic subunit
nr	gi\|672111444\|ref\|XP_008800728.1\|	4.37E-180	PREDICTED: uncharacterized protein At1g18480 [Phoenix dactylifera]
Swissprot	tr\|Q944L7\|Y1480_ARATH	2.00E-151	Uncharacterized protein At1g18480
trEMBL	tr\|M0SFZ1\|M0SFZ1_MUSAM	5.00E-180	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr3P19250_001}
TAIR	AT1G18480_1	1.00E-148	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000008	11729935	11733179	+

Transcript Sequence
>GWHTAAEX000539 TGGGTGCAAGACACTATCAACAAAAAGACCTCAATTGCTTAATGATCTATCCGAGGAAGATGGAAGAGGGAGGAGGAGCCTCATCCGACCTAACATGCGACAATCTTCCTGGCCCTCTCTCCGCCTTCATTAACGCCTTCGTCGACTTCTCCGTGAGCGGCCTCTTCTTCCCAAACCCTAACCCTAACCCTAACCCTAAGAACCTTAATCTCTCTTCCAGCCCCACGTCAGCGTTCTTGACGCGCTTTCCATCCCCTTCCCGCCTTGTCGCCATCGGCGATCTTCACGGCGACTACACTAAGTCTCTCCAAACTTTCTCCCTCGCAGGCCTGACCGATTCATCCTCCCTCCATTGGATTGGCGGCGATACCGTCGCCATTCAGATCGGCGACGTCCTCGATCGCGGCGGCGATGAGATCCGCCTCCTCTACCTTCTTCACCGCCTCAAGATGGAAGCCTCTCTCGCAGGGGGCCGCTTTCTCACCGTCCTCGGAAATCATGAGGTCATGAACATTGATGGCGATTTCCGTTACGTAACCCCGGCGGGCCTCGAGGAATTCAAGCAATGGGGGCAATGGTTCAGAGTCGGTCTCTCCATGAAGCGCCTCTGCCCGGGCATTGAAAAACCGATAGATCCCTTCCGAGGAATCCCCACTTCCTTTCCCGGAGTTAAAAAGGAGTTCTGGGAGGGATTTCGGGCTAGGATCGCAGCCCTTCAACCTGGCGGCGCCCTCGCCCAGAGATTCTTGGCCTGCAATCAGACGGTCGCGGTGGTCGGAGATTCTGTTTTCGTCCATGGAGGACTTTTGAAGTCCCACGTTGAGTATGGCTTAGAGAGAATCAATGGGGAAGCGAGGGATTGGGTTAGTGGCTTGAATGGAGGGCGATCTCCTTGTCACATGAGAGGGAGGGACAGTGTGGTTTGGTTGAGAAGGTTTTCTGATGGCTTTAACTGTGATTGCCAGCATCTTGAGGGCGTTCTTTCTATGATTTCCGGAGTTAGGAGGATGGTGATGGGGCATACCATACAGAAACATGGGATCAATTCTGTCTGCGAGAACAGGGCTATCAGAATAGATGTTGGATTATCCCAAGGGTGTTCGAATGGGTTGCCTGAGGTGCTTGAGATCAATGGAGGCTTGGACTTGAGAGTGATTACTGCAAATGCACTGTATGCTCACAAACAGAAGGCACCTGTGGTGAGGGAGGAAGCAAAGGCTGGGCTTTCTTTTCTGGTTGCTGAGCGTAGATTGCAGGAAGTAGAAGCTGTGGCTTAGGCAGAAACATGCTTTTCTGATGCTTATAGTTGCTGTTGCACTGGACATAATGATTCTGCGATGGAGCCTTAATGGAGAAAGCAAGTTTGGACAGATTGTTGTTGCTTGCAATCAATTTACTTGGGCTGGTTCCTGCGGATTGGCTGTATCGGTGGGCACGGATGGCGTGATCGCCGTGCCTCCTCCGGTATATGAAAGAGCGATTCCGATGGCCCAAAAAGAAGGCGCGATGATTGTGTGATGGACAAGATTGTCCGGTGCTGTAGACTTGCCGGATTGCGGCGAGAAGGGGCAACCGGAATCCCATCGGAAGCAAGGCAAGGGCTCGGTCGGCTCGTGTAATGATTCCTAGTAAAAATATCACCTTTTCTTCTTTCTTTTTTTTTATGATCTTTACCCGTATAATAAAAAAAAATAAAATTTACCTATAAAATAATTAATCTTTAAATATTATCCAAACAACCCTTAATTTTTAAAAATTAACGAAATATATCATATTCATAACCCTGATTACTCTCATCGAGCGCCGACCCTTCATTCAGGAAGTCTTCTATTCCCGATGGAGCTTTTCTTGAGTTTTTCATCATTATATGGGCATAATGGCCTCTGCAGTCGAATCACTGAGACGCCCTTCTTTTGCTCCCTATTCACTAGAAAATAAACCTCACCAAGGTCGTTCTTCATTTCTCCAGCGTTTACATTCTCTAAAAAGACGTCAGTAGCATGACTCACTGAATGTATGTTAAGTCGTTACTTGCTGGGTTGCATGCATGCAAGGTTCAATGTCCCTCTCACTGGTTTTGTCTTTTGGCTGAAGTTTTTCAAAGGCAGAGAAAAGGCTCTCGAAAGAAGGTGGACCCTGAACCCTAAACCCTAAATTCCGCCGCTTCTTCGGCTTTCATCGATTCTACTGTGGGTGCTTTGTATGAACTCCAGAAAACCTCCGATTCAGCTTGCAACTTGCTTAATTTTGAATGCTTATCCTCAAAAGCAAGTTTTGTGTCTAATAGCTGCATTTGAACCTATTTTTCATCTAATAGCTGCATTTGAACCCATGTCTCATCCATCTAATAGCATCATTTGAACCCCCGAGAAAAGCTTCAACGAAAGATTTCTAATGGAAGGGTGGGTGAAGTTGAACTAAGCCTGCTCAGAGCGAATTTGCTGAGTTTGTTTAATTGAATAAATCCTCATTTTTAACTTGCACTGCTAGAATAGCATTTGCCTTCTCTTAGAGAGTAGTAAAGTGAACGGTGATAAAAAATGATATATTTCGTTAATTTAAAATAATTTGAGTGATATATATGTAATATTTTTAAATTATATGTTTTGTAGTTAAATTTTAAAGCTTGTGTTTAGAGTGGCTTTGAATTCGATCGAGTCACCTCATACTTGAACTTGAATCAAATTTATTCGAGTTCGAGTCGAGCTCTAATCGAGTTTGAGTCATTTTAAATAGAGTTTAGAGTCAAGATGTATGACTCAAATTCGACTTAAAAAATTTGGAGTTTGAGTCAAGTCAAAATATCT

Network for GWHGAAEX000539

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00149.27	Metallophos	74	187	5.00E-08

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0016787	Molecular Function	hydrolase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	6.820
SRP064423	SRR2545915	Juvenile tuber	6.980
SRP108465	SRR5643513	five period of Gastrodia elata	13.380
	SRR5643514	five period of Gastrodia elata	10.340
	SRR5643515	five period of Gastrodia elata	12.230
	SRR5643524	five period of Gastrodia elata	12.100
	SRR5643525	five period of Gastrodia elata	11.960
	SRR5643528	five period of Gastrodia elata	11.170
	SRR5643658	five period of Gastrodia elata	9.720
	SRR5643659	five period of Gastrodia elata	10.010
	SRR5643660	five period of Gastrodia elata	10.570
	SRR5643661	five period of Gastrodia elata	12.080
	SRR5643662	five period of Gastrodia elata	13.200
	SRR5643663	five period of Gastrodia elata	11.140
	SRR5643664	five period of Gastrodia elata	11.910
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	11.400
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	9.730
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	11.780
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	11.340
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	13.030
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	14.940
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	10.980
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	11.800
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	11.130
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	11.630
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	12.680
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	12.680
SRP279888	Gastro	Gastrodia elata tuber	11.61
	Juven	Juvenile tuber	13.02
	Mother_Gastro	Mother tuber of Gastrodia elata	21.62
	Mother_Juven	Mother tuber of Juvenile	15.28