Detail information of GWHGAAEX000541/evm.TU.scaffold_1.278


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743856748|ref|XP_010941940.1|1.13E-165PREDICTED: uncharacterized protein LOC105060052 [Elaeis guineensis]
trEMBLtr|A0A096T2S2|A0A096T2S2_MAIZE3.00E-157Uncharacterized protein {ECO:0000313|EnsemblPlants:GRMZM2G179906_P02}
TAIRAT1G517704.00E-145Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000081184922311853650-
Transcript Sequence

Network for GWHGAAEX000541

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02485.20Branch1163422.70E-82
Protein Sequence

Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGTnc
Carbohydrate-Active enzymes FamilyGTnc

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0008375Molecular Functionacetylglucosaminyltransferase activity
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms20.560
SRR2545915Juvenile tuber14.380
SRP108465SRR5643513five period of Gastrodia elata28.460
SRR5643514five period of Gastrodia elata29.810
SRR5643515five period of Gastrodia elata57.540
SRR5643524five period of Gastrodia elata33.970
SRR5643525five period of Gastrodia elata53.230
SRR5643528five period of Gastrodia elata106.100
SRR5643658five period of Gastrodia elata66.010
SRR5643659five period of Gastrodia elata28.970
SRR5643660five period of Gastrodia elata24.450
SRR5643661five period of Gastrodia elata35.110
SRR5643662five period of Gastrodia elata37.880
SRR5643663five period of Gastrodia elata30.490
SRR5643664five period of Gastrodia elata45.020
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_127.340
SRR6049655Rhizomagastrodiae_C368-T10_good_128.980
SRR6049656Rhizomagastrodiae_C368-T07_good_118.480
SRR6049657Rhizomagastrodiae_C368-T07_good_119.150
SRR6049658Rhizomagastrodiae_C368-T04_good_121.290
SRR6049659Rhizomagastrodiae_C368-T04_good_124.600
SRR6049660Rhizomagastrodiae_C368-T01_good_128.380
SRR6049661Rhizomagastrodiae_C368-T04_good_117.920
SRR6049662Rhizomagastrodiae_C368-T01_good_117.470
SRR6049663Rhizomagastrodiae_C368-T01_good_126.850
SRR6049664Rhizomagastrodiae_C368-T10_good_133.220
SRR6049665Rhizomagastrodiae_C368-T10_good_133.220
SRP279888GastroGastrodia elata tuber 20.61
JuvenJuvenile tuber18.30
Mother_GastroMother tuber of Gastrodia elata 116.81
Mother_JuvenMother tuber of Juvenile 113.50