Detail information of GWHGAAEX000544/evm.TU.scaffold_1.281


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|294083719|ref|YP_003550476.1|2.00E-90NADH-quinone oxidoreductase subunit I [Candidatus Puniceispirillum marinum IMCC1322]
KOGKOG32564.00E-131NADH:ubiquinone oxidoreductase, NDUFS8/23 kDa subunit
nrgi|89276311|gb|ABD66512.1|1.04E-137mitochondrial NADH:ubiquinone oxidoreductase complex I [Gymnadenia conopsea]
Swissprottr|Q42599|NDS8A_ARATH1.00E-131NADH dehydrogenase [ubiquinone] iron-sulfur protein 8-A, mitochondrial (Precursor)
trEMBLtr|Q207T8|Q207T8_GYMCO4.00E-138Mitochondrial NADH:ubiquinone oxidoreductase complex I {ECO:0000313|EMBL:ABD66512.1}
TAIRAT1G790104.00E-131Alpha-helical ferredoxin

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000081193200311985590+
Transcript Sequence

Network for GWHGAAEX000544

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01016.18Ribosomal_L27401204.70E-37
PF12838.6Fer4_73383921.30E-12
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K03941NDUFS8 Metabolic pathways map01100
Oxidative phosphorylationmap00190
Retrograde endocannabinoid signalingmap04723
Thermogenesismap04714

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0006412Biological Processtranslation
GO:0003735Molecular Functionstructural constituent of ribosome
GO:0051539Molecular Function4 iron, 4 sulfur cluster binding
GO:0016651Molecular Functionoxidoreductase activity, acting on NAD(P)H
GO:0005840Cellular Componentribosome
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms44.770
SRR2545915Juvenile tuber59.160
SRP108465SRR5643513five period of Gastrodia elata55.380
SRR5643514five period of Gastrodia elata84.850
SRR5643515five period of Gastrodia elata65.860
SRR5643524five period of Gastrodia elata80.300
SRR5643525five period of Gastrodia elata58.980
SRR5643528five period of Gastrodia elata55.370
SRR5643658five period of Gastrodia elata45.360
SRR5643659five period of Gastrodia elata55.340
SRR5643660five period of Gastrodia elata54.570
SRR5643661five period of Gastrodia elata59.600
SRR5643662five period of Gastrodia elata56.560
SRR5643663five period of Gastrodia elata60.410
SRR5643664five period of Gastrodia elata57.950
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_151.910
SRR6049655Rhizomagastrodiae_C368-T10_good_160.250
SRR6049656Rhizomagastrodiae_C368-T07_good_157.280
SRR6049657Rhizomagastrodiae_C368-T07_good_143.160
SRR6049658Rhizomagastrodiae_C368-T04_good_161.230
SRR6049659Rhizomagastrodiae_C368-T04_good_153.950
SRR6049660Rhizomagastrodiae_C368-T01_good_153.900
SRR6049661Rhizomagastrodiae_C368-T04_good_157.870
SRR6049662Rhizomagastrodiae_C368-T01_good_174.310
SRR6049663Rhizomagastrodiae_C368-T01_good_168.940
SRR6049664Rhizomagastrodiae_C368-T10_good_170.550
SRR6049665Rhizomagastrodiae_C368-T10_good_170.550
SRP279888GastroGastrodia elata tuber 87.00
JuvenJuvenile tuber51.16
Mother_GastroMother tuber of Gastrodia elata 42.79
Mother_JuvenMother tuber of Juvenile 50.47