Detail information of GWHGAAEX000545/evm.TU.scaffold_1.282


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|146298365|ref|YP_001192956.1|4.00E-33two component regulator [Flavobacterium johnsoniae UW101]
nrgi|672127559|ref|XP_008787247.1|0PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g16250 [Phoenix dactylifera]
Swissprottr|C0LGK4|Y2165_ARATH0Probable LRR receptor-like serine/threonine-protein kinase At2g16250 (Precursor)
trEMBLtr|A0A059BQR5|A0A059BQR5_EUCGR0Uncharacterized protein {ECO:0000313|EMBL:KCW68241.1}
TAIRAT2G162500Leucine-rich repeat protein kinase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000081199383912000264-
Transcript Sequence

Network for GWHGAAEX000545

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08263.11LRRNT_224580.00016
PF13855.5LRR_81442024.40E-07
PF07714.16Pkinase_Tyr5147073.70E-11
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_LRR-XIV

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0005515Molecular Functionprotein binding
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2.390
SRR2545915Juvenile tuber5.710
SRP108465SRR5643513five period of Gastrodia elata10.310
SRR5643514five period of Gastrodia elata11.050
SRR5643515five period of Gastrodia elata7.290
SRR5643524five period of Gastrodia elata8.290
SRR5643525five period of Gastrodia elata5.660
SRR5643528five period of Gastrodia elata11.620
SRR5643658five period of Gastrodia elata6.310
SRR5643659five period of Gastrodia elata2.760
SRR5643660five period of Gastrodia elata2.370
SRR5643661five period of Gastrodia elata2.680
SRR5643662five period of Gastrodia elata3.090
SRR5643663five period of Gastrodia elata2.470
SRR5643664five period of Gastrodia elata2.940
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.200
SRR6049655Rhizomagastrodiae_C368-T10_good_117.260
SRR6049656Rhizomagastrodiae_C368-T07_good_116.130
SRR6049657Rhizomagastrodiae_C368-T07_good_17.320
SRR6049658Rhizomagastrodiae_C368-T04_good_16.540
SRR6049659Rhizomagastrodiae_C368-T04_good_16.680
SRR6049660Rhizomagastrodiae_C368-T01_good_110.170
SRR6049661Rhizomagastrodiae_C368-T04_good_14.530
SRR6049662Rhizomagastrodiae_C368-T01_good_114.290
SRR6049663Rhizomagastrodiae_C368-T01_good_113.260
SRR6049664Rhizomagastrodiae_C368-T10_good_124.790
SRR6049665Rhizomagastrodiae_C368-T10_good_124.790
SRP279888GastroGastrodia elata tuber 3.62
JuvenJuvenile tuber8.24
Mother_GastroMother tuber of Gastrodia elata 8.30
Mother_JuvenMother tuber of Juvenile 4.04