Detail information of GWHGAAEX000553/evm.TU.scaffold_1.289


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG21830Prolylcarboxypeptidase (angiotensinase C)
nrgi|672158305|ref|XP_008798888.1|0PREDICTED: lysosomal Pro-X carboxypeptidase-like isoform X1 [Phoenix dactylifera]
Swissprottr|Q1PF50|EDA2_ARATH2.00E-25Probable serine protease EDA2 (Precursor)
trEMBLtr|M0TBW7|M0TBW7_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P31720_001}
TAIRAT5G657600Serine carboxypeptidase S28 family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000081209737412138560+
Transcript Sequence

Network for GWHGAAEX000553

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module5

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05577.11Peptidase_S28494706.90E-82
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01285PRCP Renin-angiotensin system map04614
Protein digestion and absorptionmap04974

Gene Ontology

GO term OntologyName
GO:0006508Biological Processproteolysis
GO:0008236Molecular Functionserine-type peptidase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms21.230
SRR2545915Juvenile tuber31.190
SRP108465SRR5643513five period of Gastrodia elata28.090
SRR5643514five period of Gastrodia elata32.960
SRR5643515five period of Gastrodia elata27.260
SRR5643524five period of Gastrodia elata34.860
SRR5643525five period of Gastrodia elata17.530
SRR5643528five period of Gastrodia elata25.280
SRR5643658five period of Gastrodia elata23.240
SRR5643659five period of Gastrodia elata18.600
SRR5643660five period of Gastrodia elata14.770
SRR5643661five period of Gastrodia elata8.510
SRR5643662five period of Gastrodia elata11.410
SRR5643663five period of Gastrodia elata16.070
SRR5643664five period of Gastrodia elata10.640
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_117.650
SRR6049655Rhizomagastrodiae_C368-T10_good_139.600
SRR6049656Rhizomagastrodiae_C368-T07_good_114.560
SRR6049657Rhizomagastrodiae_C368-T07_good_114.040
SRR6049658Rhizomagastrodiae_C368-T04_good_10.780
SRR6049659Rhizomagastrodiae_C368-T04_good_10.630
SRR6049660Rhizomagastrodiae_C368-T01_good_14.100
SRR6049661Rhizomagastrodiae_C368-T04_good_10.490
SRR6049662Rhizomagastrodiae_C368-T01_good_14.490
SRR6049663Rhizomagastrodiae_C368-T01_good_11.150
SRR6049664Rhizomagastrodiae_C368-T10_good_127.440
SRR6049665Rhizomagastrodiae_C368-T10_good_127.440
SRP279888GastroGastrodia elata tuber 4.96
JuvenJuvenile tuber13.20
Mother_GastroMother tuber of Gastrodia elata 5.06
Mother_JuvenMother tuber of Juvenile 9.04