Detail information of GWHGAAEX000557/evm.TU.scaffold_1.293


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG08361.00E-14F-actin capping protein, alpha subunit
nrgi|695072805|ref|XP_009383539.1|2.85E-20PREDICTED: F-actin-capping protein subunit alpha-like [Musa acuminata subsp. malaccensis]
Swissprottr|O82631|CAPZA_ARATH4.00E-15F-actin-capping protein subunit alpha
trEMBLtr|M0RRF3|M0RRF3_MUSAM1.00E-20Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P11730_001}
TAIRAT3G055201.00E-14Subunits of heterodimeric actin filament capping protein Capz superfamily

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000081220541112205703-
Transcript Sequence

Network for GWHGAAEX000557

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K10364CAPZA Endocytosis map04144

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms5.090
SRR2545915Juvenile tuber13.040
SRP108465SRR5643513five period of Gastrodia elata11.320
SRR5643514five period of Gastrodia elata0.000
SRR5643515five period of Gastrodia elata10.500
SRR5643524five period of Gastrodia elata0.000
SRR5643525five period of Gastrodia elata10.540
SRR5643528five period of Gastrodia elata0.000
SRR5643658five period of Gastrodia elata0.000
SRR5643659five period of Gastrodia elata2.850
SRR5643660five period of Gastrodia elata3.660
SRR5643661five period of Gastrodia elata3.340
SRR5643662five period of Gastrodia elata0.000
SRR5643663five period of Gastrodia elata5.170
SRR5643664five period of Gastrodia elata3.390
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.000
SRR6049655Rhizomagastrodiae_C368-T10_good_10.000
SRR6049656Rhizomagastrodiae_C368-T07_good_112.820
SRR6049657Rhizomagastrodiae_C368-T07_good_10.000
SRR6049658Rhizomagastrodiae_C368-T04_good_13.700
SRR6049659Rhizomagastrodiae_C368-T04_good_14.490
SRR6049660Rhizomagastrodiae_C368-T01_good_17.220
SRR6049661Rhizomagastrodiae_C368-T04_good_10.000
SRR6049662Rhizomagastrodiae_C368-T01_good_10.000
SRR6049663Rhizomagastrodiae_C368-T01_good_16.570
SRR6049664Rhizomagastrodiae_C368-T10_good_115.960
SRR6049665Rhizomagastrodiae_C368-T10_good_115.960
SRP279888GastroGastrodia elata tuber 5.99
JuvenJuvenile tuber6.36
Mother_GastroMother tuber of Gastrodia elata 13.53
Mother_JuvenMother tuber of Juvenile 12.40