Detail information of GWHGAAEX000558/evm.TU.scaffold_1.295


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG21720Uncharacterized conserved protein
nrgi|743784421|ref|XP_010921659.1|0PREDICTED: uncharacterized protein C57A7.06-like [Elaeis guineensis]
trEMBLtr|D7U2A7|D7U2A7_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI36873.3}
TAIRAT4G024000U3 ribonucleoprotein (Utp) family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000081220648412234852-
Transcript Sequence

Network for GWHGAAEX000558

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04615.12Utp141308493.50E-172
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14567UTP14 Ribosome biogenesis in eukaryotes map03008

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms25.210
SRR2545915Juvenile tuber35.020
SRP108465SRR5643513five period of Gastrodia elata20.620
SRR5643514five period of Gastrodia elata21.300
SRR5643515five period of Gastrodia elata18.530
SRR5643524five period of Gastrodia elata20.430
SRR5643525five period of Gastrodia elata10.200
SRR5643528five period of Gastrodia elata9.170
SRR5643658five period of Gastrodia elata9.570
SRR5643659five period of Gastrodia elata22.370
SRR5643660five period of Gastrodia elata25.780
SRR5643661five period of Gastrodia elata21.790
SRR5643662five period of Gastrodia elata20.220
SRR5643663five period of Gastrodia elata19.200
SRR5643664five period of Gastrodia elata21.440
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_126.140
SRR6049655Rhizomagastrodiae_C368-T10_good_123.080
SRR6049656Rhizomagastrodiae_C368-T07_good_119.700
SRR6049657Rhizomagastrodiae_C368-T07_good_127.250
SRR6049658Rhizomagastrodiae_C368-T04_good_123.520
SRR6049659Rhizomagastrodiae_C368-T04_good_131.330
SRR6049660Rhizomagastrodiae_C368-T01_good_127.220
SRR6049661Rhizomagastrodiae_C368-T04_good_124.700
SRR6049662Rhizomagastrodiae_C368-T01_good_120.120
SRR6049663Rhizomagastrodiae_C368-T01_good_121.330
SRR6049664Rhizomagastrodiae_C368-T10_good_118.300
SRR6049665Rhizomagastrodiae_C368-T10_good_118.300
SRP279888GastroGastrodia elata tuber 16.41
JuvenJuvenile tuber29.51
Mother_GastroMother tuber of Gastrodia elata 11.65
Mother_JuvenMother tuber of Juvenile 15.54