Detail information of GWHGAAEX000562/evm.TU.scaffold_1.298


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG19651.00E-18Sodium/hydrogen exchanger protein
nrgi|743784716|ref|XP_010921731.1|6.05E-24PREDICTED: sodium/hydrogen exchanger 2-like [Elaeis guineensis]
Swissprottr|Q56XP4|NHX2_ARATH4.00E-19Sodium/hydrogen exchanger 2
trEMBLtr|C5X4U8|C5X4U8_SORBI1.00E-22Sodium/hydrogen exchanger {ECO:0000256|RuleBase:RU003722}
TAIRAT3G050301.00E-18sodium hydrogen exchanger 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000081235371312354024-
Transcript Sequence

Network for GWHGAAEX000562

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms11.480
SRR2545915Juvenile tuber10.070
SRP108465SRR5643513five period of Gastrodia elata36.390
SRR5643514five period of Gastrodia elata33.900
SRR5643515five period of Gastrodia elata37.050
SRR5643524five period of Gastrodia elata39.040
SRR5643525five period of Gastrodia elata80.120
SRR5643528five period of Gastrodia elata40.510
SRR5643658five period of Gastrodia elata43.870
SRR5643659five period of Gastrodia elata34.790
SRR5643660five period of Gastrodia elata46.280
SRR5643661five period of Gastrodia elata40.100
SRR5643662five period of Gastrodia elata44.280
SRR5643663five period of Gastrodia elata49.460
SRR5643664five period of Gastrodia elata51.430
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_117.290
SRR6049655Rhizomagastrodiae_C368-T10_good_163.700
SRR6049656Rhizomagastrodiae_C368-T07_good_137.080
SRR6049657Rhizomagastrodiae_C368-T07_good_134.900
SRR6049658Rhizomagastrodiae_C368-T04_good_119.900
SRR6049659Rhizomagastrodiae_C368-T04_good_127.710
SRR6049660Rhizomagastrodiae_C368-T01_good_133.200
SRR6049661Rhizomagastrodiae_C368-T04_good_125.460
SRR6049662Rhizomagastrodiae_C368-T01_good_129.210
SRR6049663Rhizomagastrodiae_C368-T01_good_130.820
SRR6049664Rhizomagastrodiae_C368-T10_good_136.200
SRR6049665Rhizomagastrodiae_C368-T10_good_136.200
SRP279888GastroGastrodia elata tuber 26.82
JuvenJuvenile tuber70.52
Mother_GastroMother tuber of Gastrodia elata 35.40
Mother_JuvenMother tuber of Juvenile 51.41