Detail information of GWHGAAEX000563/evm.TU.scaffold_1.299


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG04399.00E-52VAMP-associated protein involved in inositol metabolism
nrgi|743784708|ref|XP_010921728.1|5.17E-109PREDICTED: vesicle-associated protein 1-2-like [Elaeis guineensis]
Swissprottr|B9DHD7|VAP22_ARATH2.00E-53Vesicle-associated protein 2-2, N-terminally processed
trEMBLtr|D7TUW5|D7TUW5_VITVI2.00E-94Putative uncharacterized protein {ECO:0000313|EMBL:CBI34290.3}
TAIRAT1G088209.00E-52vamp/synaptobrevin-associated protein 27-2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000081235763012368513-
Transcript Sequence

Network for GWHGAAEX000563

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00635.25Motile_Sperm61025.20E-28
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005789Cellular Componentendoplasmic reticulum membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms37.620
SRR2545915Juvenile tuber41.540
SRP108465SRR5643513five period of Gastrodia elata35.930
SRR5643514five period of Gastrodia elata34.990
SRR5643515five period of Gastrodia elata41.330
SRR5643524five period of Gastrodia elata35.990
SRR5643525five period of Gastrodia elata30.780
SRR5643528five period of Gastrodia elata37.610
SRR5643658five period of Gastrodia elata47.260
SRR5643659five period of Gastrodia elata41.550
SRR5643660five period of Gastrodia elata41.000
SRR5643661five period of Gastrodia elata40.530
SRR5643662five period of Gastrodia elata49.460
SRR5643663five period of Gastrodia elata49.150
SRR5643664five period of Gastrodia elata46.530
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_128.110
SRR6049655Rhizomagastrodiae_C368-T10_good_180.700
SRR6049656Rhizomagastrodiae_C368-T07_good_132.170
SRR6049657Rhizomagastrodiae_C368-T07_good_126.530
SRR6049658Rhizomagastrodiae_C368-T04_good_131.720
SRR6049659Rhizomagastrodiae_C368-T04_good_132.670
SRR6049660Rhizomagastrodiae_C368-T01_good_131.040
SRR6049661Rhizomagastrodiae_C368-T04_good_130.520
SRR6049662Rhizomagastrodiae_C368-T01_good_142.360
SRR6049663Rhizomagastrodiae_C368-T01_good_134.910
SRR6049664Rhizomagastrodiae_C368-T10_good_139.290
SRR6049665Rhizomagastrodiae_C368-T10_good_139.290
SRP279888GastroGastrodia elata tuber 41.04
JuvenJuvenile tuber39.80
Mother_GastroMother tuber of Gastrodia elata 50.54
Mother_JuvenMother tuber of Juvenile 72.97