Gene detail

Detail information of GWHGAAEX000566/evm.TU.scaffold_1.303

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|193213780\|ref\|YP_001994979.1\|	5.00E-09	heat shock protein DnaJ domain-containing protein [Chloroherpeton thalassium ATCC 35110]
KOG	KOG0724	0	Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains
nr	gi\|743786224\|ref\|XP_010922120.1\|	0	PREDICTED: dnaJ homolog subfamily C member 2 [Elaeis guineensis]
Swissprot	tr\|Q39079\|DNJ13_ARATH	3.00E-07	Chaperone protein dnaJ 13
trEMBL	tr\|B9GXK5\|B9GXK5_POPTR	0	DNAJ heat shock N-terminal domain-containing family protein {ECO:0000313\|EMBL:EEE78942.1}
TAIR	AT3G11450	0	DnaJ domain ;Myb-like DNA-binding domain

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000008	12510984	12520316	+

Transcript Sequence
>GWHTAAEX000566 GTATAGACTAAATGCGTGGGGAAACTGCGATAGCTTAAACCCTAGGTGAAAACAAAAAAACGAAAAAAAAAGGTAACTTTCTTGCCGATCTCCGTCTCCTTTCGCACGGTCGTCGACGGCGACATACGCTGCGAGCATATAGCTCCAGTTTCAAGGTTTCCACTTTGAGTTTCGTCTCTAATCCCTTATAAAAGCTTACCCTTTTGCATCCAATAGCTTAGCCGACTGTGGACTCTCTCTCACGATTTCATTGACTCGGTTGCTTCTCTCCTCTTGGTCAAGAGAGAGAAAGAGGGAGCCTGCTTGAGTTCACTGTTCTTTTACAGAAAATAATCATTCCTGCAAGGCAATTGATTTTGTCATACATTTAGAACTAATTTTTAAACTCGGGATCAGGCGCACTTGTATTTGTTCTCACTATCTGCCACGAATAAGCACAAATATATATTTTCCCTCTTTCATTGTTGATGGTATGAGGAACCTTCTGCTTATCACATATTCAGAAGAGCTTCAGGATGGAGAGCCGCTGGTTGCTTCATCAAATTGTCTTCCTGTGAAGGCTTTAAATTATGAGCCTGCAGGTCATGCATTTCATTCTGCTGCACTTAAATTCTTTGGATATTGTGAAGAAGAAGAGACAGACACTGATGAGCAAAGCGTGTTGTCTGATGATAGAAACCAATCACATATACCATCATCAGAGTTTTACAGTAACAAAGGGAAAAAGAAATCTGGTTCTGGTGACAAGCAACAGGACCATTATGCGCTGTTAGGCTTGGGGCATTTGCGTTTTCTGGCTACTGAGGAGCAGATACGTAAGAGTTACCGTGAGACTGCCTTGAAATATCATCCTGATAAGCAGGCTGCCATTCTTCTCGCTGAAGAAACAGATGCCACAAAACAAGCAAAGAAGGATGAGATAGAAAATCATTTTAAGTCCATTCAAGAAGCATATGAGATTCTAATAGATCCTATAAAAAGAAGGATCTATGACTCCACAGATGAGTTTGATGATGAAATTCCAATTGAATGTGCACCACAAGACTTCTTCAAGGTCTTTGGTCCTGCATTCCTAAGGAATGCAAGGTGGTCTGTAAATCAGCCTGCTCCCTGCTTAGGGGAAGACAAAACTGTAATGACTGAAGTGGATAGCTTCTATAACTTCTGGTATAATTTCAAAAGTTGGAGGGAGTTCCCACATGCTGATGAGTTTGATCTGGAGCAGGCTGAGTCCCGTGACCATAAAAGATGGATGGAGAGGCAGAATGCAAAACTTAGAGAAAAAGCCAAGAAAGAAGAATATGCACGTATACGATCTCTTGTTGACAGCGCATATAAGAGAGACCCGAGAATACTTAGGAGAAAGGAGGAAGAAAAGGTTGAGAAGCAGAGGAAAAAGGAGGCAAAGTTCTTGGCAAGGAAATTGCAAGAAGAAGAGGCTGTAAGGGCAGCTGACGAGGAAAGACGTGTGAAAGAGGAGGAAGAGAAGAGAGCAGCTGAAGTTGCCATGAATCAGAAGAAGCAAAAAGAAAAGGATAAGAAGCTTCTTCGGAAGGAGAGAAACCGGTTACGGTTGCTTTCTTCTGCTTTGGCTGCCAACTCCTTGATAAATTATTCAGAAGAAGAGATTGAAAACTTATGCATGTCTCTAGAGATGGAGCAGCTTAGAAATTTGTGTGATAGCATGGAGCACAAAGAAGGGGTTGAAAGAGCACGTTTGCTAAATTATGCATTGAATAAATGGAATTTTGTGGCTGCACAACCTGAAGAAAAGTGCCTGCAAGCCAATAACTCTTCATTTCATGTTGTTGCAGTTGTCAAGCCTGACAGCATATTAACCAATGAGAAGAAGGACAAACCCTGGGGAAAGGAAGAAATTGAGATGTTGAGAAAGGGTATGCATAAATACCCCAAGGGAACTTCTAGGAGATGGGAGGTCATTTCTGATTACATAGGAACTGGGAGATCAGTTGAAGAGATTCTAAAAGCAACTAAGACAGTTCTTCTGCAGAAACCAGACTCTACAAATGCATTTGGTACTTTTCTTGAGAAAAGAAAGCCTGCACCATCTATAGCATCACCGCTTACCACTAGACTAGAATCAGAAGGTTCTCATGTTAATGGAGTTGGACAAAAGCCTTCAGTTGCAGAAACAAAACTATCTTCAGACCATGATATGTGTGACGACAATGCAGGAGGGGAAGTTTCTCTTTCTAATGGAGTTTCTTCAGGTACAGAGGACACATGGTCATCTACGCAAGAAAGAGCTCTTATCCAAGCACTGAAAACCTTTCCAAAGGAAACTAGCCAGCGCTGGGAAAGGGTTGCTGCTGCAGTTCCAAGTAAAACTGTAAACCAATGCAAAAAGAAGTTTGCATTGATGAAGGAGAGCTTCAGGAGCAAGAAAGGTTCTGATTGATAGGTTAGAGGTCAAGCGTCAAGCAAGAGCTATATAGCGTGACAAGTGATATTTTTCTGCAACTAGCACCACCAAATATAGCGTTTTCATTCCACACCAGCCGTTATGGTATTTACACGAAGTATCTATATTTCTTGAATTCTTAAATATCTGTTCGATTCCCTATTTTTCTGCTGGCAGTTAATTGATTTAATATTTTGGTTTACAAAAGTAGAAACAACTCAGTGATTTCTCCAAATGAAGAGATAGTTTCTGTACTTGCATATTTATTTTTTATTAAAATTATTGGTTAGAAAAAATATTTGATTGAACTGATAGATTTTAATAAATTATTTCTTTCTTGATTTCAT

Network for GWHGAAEX000566

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00226.30	DnaJ	95	174	7.70E-18
PF00249.30	Myb_DNA-binding	462	503	8.50E-06
PF00249.30	Myb_DNA-binding	591	634	7.10E-07

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	MYB

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0003677	Molecular Function	DNA binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	27.710
SRP064423	SRR2545915	Juvenile tuber	27.680
SRP108465	SRR5643513	five period of Gastrodia elata	23.640
	SRR5643514	five period of Gastrodia elata	16.560
	SRR5643515	five period of Gastrodia elata	24.410
	SRR5643524	five period of Gastrodia elata	18.660
	SRR5643525	five period of Gastrodia elata	23.820
	SRR5643528	five period of Gastrodia elata	32.530
	SRR5643658	five period of Gastrodia elata	24.190
	SRR5643659	five period of Gastrodia elata	23.640
	SRR5643660	five period of Gastrodia elata	23.560
	SRR5643661	five period of Gastrodia elata	20.970
	SRR5643662	five period of Gastrodia elata	26.240
	SRR5643663	five period of Gastrodia elata	22.090
	SRR5643664	five period of Gastrodia elata	22.140
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	18.340
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	31.510
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	20.090
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	18.890
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	19.590
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	21.650
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	20.170
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	17.300
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	21.630
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	24.390
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	22.230
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	22.230
SRP279888	Gastro	Gastrodia elata tuber	18.91
	Juven	Juvenile tuber	17.19
	Mother_Gastro	Mother tuber of Gastrodia elata	26.63
	Mother_Juven	Mother tuber of Juvenile	20.68