Detail information of GWHGAAEX000570/evm.TU.scaffold_1.310


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG12673.00E-55Mitochondrial transcription termination factor, mTERF
nrgi|672183474|ref|XP_008812017.1|1.97E-94PREDICTED: uncharacterized protein LOC103723012 [Phoenix dactylifera]
trEMBLtr|B9I9V1|B9I9V1_POPTR2.00E-69Uncharacterized protein {ECO:0000313|EMBL:EEE99342.2}
TAIRAT5G079003.00E-55Mitochondrial transcription termination factor family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000081272743212729234-
Transcript Sequence

Network for GWHGAAEX000570

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02536.13mTERF713541.50E-31
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilymTERF

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003690Molecular Functiondouble-stranded DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms10.700
SRR2545915Juvenile tuber8.310
SRP108465SRR5643513five period of Gastrodia elata5.940
SRR5643514five period of Gastrodia elata7.640
SRR5643515five period of Gastrodia elata6.440
SRR5643524five period of Gastrodia elata6.840
SRR5643525five period of Gastrodia elata4.560
SRR5643528five period of Gastrodia elata4.650
SRR5643658five period of Gastrodia elata3.700
SRR5643659five period of Gastrodia elata7.510
SRR5643660five period of Gastrodia elata9.510
SRR5643661five period of Gastrodia elata9.610
SRR5643662five period of Gastrodia elata10.520
SRR5643663five period of Gastrodia elata10.180
SRR5643664five period of Gastrodia elata8.170
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_17.180
SRR6049655Rhizomagastrodiae_C368-T10_good_16.270
SRR6049656Rhizomagastrodiae_C368-T07_good_16.750
SRR6049657Rhizomagastrodiae_C368-T07_good_15.980
SRR6049658Rhizomagastrodiae_C368-T04_good_16.270
SRR6049659Rhizomagastrodiae_C368-T04_good_16.440
SRR6049660Rhizomagastrodiae_C368-T01_good_16.420
SRR6049661Rhizomagastrodiae_C368-T04_good_15.450
SRR6049662Rhizomagastrodiae_C368-T01_good_16.660
SRR6049663Rhizomagastrodiae_C368-T01_good_17.840
SRR6049664Rhizomagastrodiae_C368-T10_good_19.050
SRR6049665Rhizomagastrodiae_C368-T10_good_19.050
SRP279888GastroGastrodia elata tuber 9.21
JuvenJuvenile tuber5.85
Mother_GastroMother tuber of Gastrodia elata 3.65
Mother_JuvenMother tuber of Juvenile 3.41