Detail information of GWHGAAEX000583/evm.TU.scaffold_1.328


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG00481.00E-69Transcription factor, Myb superfamily
nrgi|720090630|ref|XP_010245158.1|5.51E-81PREDICTED: myb-related protein 330-like [Nelumbo nucifera]
Swissprottr|Q9FDW1|MYB44_ARATH2.00E-36Transcription factor MYB44
trEMBLtr|A0A089PM33|A0A089PM33_GOSHI9.00E-79LOF-like transcription factor LOF4 {ECO:0000313|EMBL:AIQ82684.1}
TAIRAT1G695601.00E-69myb domain protein 105

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000081348698813488178+
Transcript Sequence

Network for GWHGAAEX000583

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00249.30Myb_DNA-binding47928.60E-16
PF00249.30Myb_DNA-binding991414.50E-15
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyMYB

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.250
SRR2545915Juvenile tuber0.000
SRP108465SRR5643513five period of Gastrodia elata0.350
SRR5643514five period of Gastrodia elata1.260
SRR5643515five period of Gastrodia elata0.160
SRR5643524five period of Gastrodia elata0.870
SRR5643525five period of Gastrodia elata0.000
SRR5643528five period of Gastrodia elata0.180
SRR5643658five period of Gastrodia elata0.470
SRR5643659five period of Gastrodia elata0.000
SRR5643660five period of Gastrodia elata0.080
SRR5643661five period of Gastrodia elata0.000
SRR5643662five period of Gastrodia elata0.080
SRR5643663five period of Gastrodia elata0.000
SRR5643664five period of Gastrodia elata0.070
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.470
SRR6049655Rhizomagastrodiae_C368-T10_good_10.090
SRR6049656Rhizomagastrodiae_C368-T07_good_10.130
SRR6049657Rhizomagastrodiae_C368-T07_good_10.360
SRR6049658Rhizomagastrodiae_C368-T04_good_10.300
SRR6049659Rhizomagastrodiae_C368-T04_good_10.270
SRR6049660Rhizomagastrodiae_C368-T01_good_11.190
SRR6049661Rhizomagastrodiae_C368-T04_good_10.570
SRR6049662Rhizomagastrodiae_C368-T01_good_14.640
SRR6049663Rhizomagastrodiae_C368-T01_good_12.470
SRR6049664Rhizomagastrodiae_C368-T10_good_10.360
SRR6049665Rhizomagastrodiae_C368-T10_good_10.360
SRP279888GastroGastrodia elata tuber 0.00
JuvenJuvenile tuber0.44
Mother_GastroMother tuber of Gastrodia elata 1.46
Mother_JuvenMother tuber of Juvenile 0.53