Detail information of GWHGAAEX000587/evm.TU.scaffold_1.335


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|20807943|ref|NP_623114.1|9.00E-24Serine/threonine protein kinase [Thermoanaerobacter tengcongensis MB4]
nrgi|720018387|ref|XP_010261770.1|6.17E-163PREDICTED: U-box domain-containing protein 35-like [Nelumbo nucifera]
Swissprottr|Q9SW11|PUB35_ARATH7.00E-107Serine/threonine-protein kinase
trEMBLtr|A0A061GGT5|A0A061GGT5_THECC1.00E-156Kinase protein with adenine nucleotide alpha hydrolases-like domain {ECO:0000313|EMBL:EOY29080.1}
TAIRAT2G243703.00E-147Protein kinase protein with adenine nucleotide alpha hydrolases-like domain

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000081374066313741853-
Transcript Sequence

Network for GWHGAAEX000587

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase1113653.60E-39
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_RLCK-IXb

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2.760
SRR2545915Juvenile tuber2.870
SRP108465SRR5643513five period of Gastrodia elata3.400
SRR5643514five period of Gastrodia elata3.790
SRR5643515five period of Gastrodia elata5.320
SRR5643524five period of Gastrodia elata1.440
SRR5643525five period of Gastrodia elata6.220
SRR5643528five period of Gastrodia elata2.190
SRR5643658five period of Gastrodia elata2.920
SRR5643659five period of Gastrodia elata4.130
SRR5643660five period of Gastrodia elata4.570
SRR5643661five period of Gastrodia elata4.060
SRR5643662five period of Gastrodia elata7.350
SRR5643663five period of Gastrodia elata6.500
SRR5643664five period of Gastrodia elata6.450
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_111.650
SRR6049655Rhizomagastrodiae_C368-T10_good_14.880
SRR6049656Rhizomagastrodiae_C368-T07_good_18.080
SRR6049657Rhizomagastrodiae_C368-T07_good_110.390
SRR6049658Rhizomagastrodiae_C368-T04_good_19.460
SRR6049659Rhizomagastrodiae_C368-T04_good_19.050
SRR6049660Rhizomagastrodiae_C368-T01_good_19.590
SRR6049661Rhizomagastrodiae_C368-T04_good_111.460
SRR6049662Rhizomagastrodiae_C368-T01_good_19.820
SRR6049663Rhizomagastrodiae_C368-T01_good_17.930
SRR6049664Rhizomagastrodiae_C368-T10_good_18.050
SRR6049665Rhizomagastrodiae_C368-T10_good_18.050
SRP279888GastroGastrodia elata tuber 5.98
JuvenJuvenile tuber12.40
Mother_GastroMother tuber of Gastrodia elata 7.00
Mother_JuvenMother tuber of Juvenile 5.45