Detail information of GWHGAAEX000590/evm.TU.scaffold_1.341
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG3296 | 2.00E-160 | Translocase of outer mitochondrial membrane complex, subunit TOM40 |
| nr | gi|672133664|ref|XP_008790463.1| | 0 | PREDICTED: mitochondrial import receptor subunit TOM40-1-like [Phoenix dactylifera] |
| Swissprot | tr|Q9LHE5|TO401_ARATH | 6.00E-161 | Mitochondrial import receptor subunit TOM40-1, N-terminally processed |
| trEMBL | tr|M0TLR7|M0TLR7_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P01650_001} |
| TAIR | AT3G20000 | 2.00E-160 | translocase of the outer mitochondrial membrane 40 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000008 | 13869380 | 13913964 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX000590
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF01459.21 | Porin_3 | 50 | 322 | 9.10E-82 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0030150 | Biological Process | protein import into mitochondrial matrix |
| GO:0055085 | Biological Process | transmembrane transport |
| GO:0008320 | Molecular Function | protein transmembrane transporter activity |
| GO:0005741 | Cellular Component | mitochondrial outer membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 42.120 |
| SRR2545915 | Juvenile tuber | 42.520 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 57.120 |
| SRR5643514 | five period of Gastrodia elata | 61.510 | |
| SRR5643515 | five period of Gastrodia elata | 50.150 | |
| SRR5643524 | five period of Gastrodia elata | 53.000 | |
| SRR5643525 | five period of Gastrodia elata | 23.150 | |
| SRR5643528 | five period of Gastrodia elata | 18.700 | |
| SRR5643658 | five period of Gastrodia elata | 16.180 | |
| SRR5643659 | five period of Gastrodia elata | 57.380 | |
| SRR5643660 | five period of Gastrodia elata | 58.970 | |
| SRR5643661 | five period of Gastrodia elata | 63.490 | |
| SRR5643662 | five period of Gastrodia elata | 55.360 | |
| SRR5643663 | five period of Gastrodia elata | 52.180 | |
| SRR5643664 | five period of Gastrodia elata | 55.460 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 54.450 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 87.330 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 67.440 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 54.890 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 58.020 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 51.640 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 70.730 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 56.640 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 72.440 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 69.820 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 72.580 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 72.580 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 56.12 |
| Juven | Juvenile tuber | 73.48 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 18.65 | |
| Mother_Juven | Mother tuber of Juvenile | 31.39 |