Detail information of GWHGAAEX000595/evm.TU.scaffold_1.348


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG12672.00E-64Mitochondrial transcription termination factor, mTERF
nrgi|672183474|ref|XP_008812017.1|2.69E-106PREDICTED: uncharacterized protein LOC103723012 [Phoenix dactylifera]
trEMBLtr|B9I9V1|B9I9V1_POPTR1.00E-71Uncharacterized protein {ECO:0000313|EMBL:EEE99342.2}
TAIRAT5G079002.00E-64Mitochondrial transcription termination factor family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000081411615514117758+
Transcript Sequence

Network for GWHGAAEX000595

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02536.13mTERF772344.50E-25
PF02536.13mTERF2453535.70E-16
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilymTERF

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003690Molecular Functiondouble-stranded DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms6.860
SRR2545915Juvenile tuber7.660
SRP108465SRR5643513five period of Gastrodia elata11.300
SRR5643514five period of Gastrodia elata12.040
SRR5643515five period of Gastrodia elata11.240
SRR5643524five period of Gastrodia elata11.220
SRR5643525five period of Gastrodia elata7.190
SRR5643528five period of Gastrodia elata7.160
SRR5643658five period of Gastrodia elata6.160
SRR5643659five period of Gastrodia elata12.690
SRR5643660five period of Gastrodia elata12.590
SRR5643661five period of Gastrodia elata11.490
SRR5643662five period of Gastrodia elata12.530
SRR5643663five period of Gastrodia elata10.850
SRR5643664five period of Gastrodia elata8.340
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_19.440
SRR6049655Rhizomagastrodiae_C368-T10_good_115.770
SRR6049656Rhizomagastrodiae_C368-T07_good_112.590
SRR6049657Rhizomagastrodiae_C368-T07_good_19.150
SRR6049658Rhizomagastrodiae_C368-T04_good_17.420
SRR6049659Rhizomagastrodiae_C368-T04_good_17.450
SRR6049660Rhizomagastrodiae_C368-T01_good_19.260
SRR6049661Rhizomagastrodiae_C368-T04_good_19.810
SRR6049662Rhizomagastrodiae_C368-T01_good_111.730
SRR6049663Rhizomagastrodiae_C368-T01_good_19.660
SRR6049664Rhizomagastrodiae_C368-T10_good_113.720
SRR6049665Rhizomagastrodiae_C368-T10_good_113.720
SRP279888GastroGastrodia elata tuber 8.98
JuvenJuvenile tuber7.56
Mother_GastroMother tuber of Gastrodia elata 7.76
Mother_JuvenMother tuber of Juvenile 4.82