Detail information of GWHGAAEX000603/evm.TU.scaffold_1.356


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|14601103|ref|NP_147630.1|2.00E-63hypothetical protein APE_0960 [Aeropyrum pernix K1]
KOGKOG07400AAA+-type ATPase
nrgi|672130642|ref|XP_008788859.1|0PREDICTED: fidgetin-like protein 1 [Phoenix dactylifera]
Swissprottr|Q9SEX2|KTNA1_ARATH5.00E-79Katanin p60 ATPase-containing subunit A1 {ECO:0000255|HAMAP-Rule:MF_03023}
trEMBLtr|M0TAQ6|M0TAQ6_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P27610_001}
TAIRAT3G271200P-loop containing nucleoside triphosphate hydrolases superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000081433472514396830+
Transcript Sequence

Network for GWHGAAEX000603

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00004.28AAA4415711.00E-38
PF09336.9Vps4_C6446786.10E-08
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.930
SRR2545915Juvenile tuber3.020
SRP108465SRR5643513five period of Gastrodia elata2.380
SRR5643514five period of Gastrodia elata2.570
SRR5643515five period of Gastrodia elata2.360
SRR5643524five period of Gastrodia elata2.070
SRR5643525five period of Gastrodia elata0.440
SRR5643528five period of Gastrodia elata0.230
SRR5643658five period of Gastrodia elata0.470
SRR5643659five period of Gastrodia elata2.480
SRR5643660five period of Gastrodia elata3.550
SRR5643661five period of Gastrodia elata3.370
SRR5643662five period of Gastrodia elata2.150
SRR5643663five period of Gastrodia elata2.330
SRR5643664five period of Gastrodia elata2.220
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_12.800
SRR6049655Rhizomagastrodiae_C368-T10_good_11.310
SRR6049656Rhizomagastrodiae_C368-T07_good_12.070
SRR6049657Rhizomagastrodiae_C368-T07_good_11.500
SRR6049658Rhizomagastrodiae_C368-T04_good_12.070
SRR6049659Rhizomagastrodiae_C368-T04_good_11.840
SRR6049660Rhizomagastrodiae_C368-T01_good_12.380
SRR6049661Rhizomagastrodiae_C368-T04_good_11.940
SRR6049662Rhizomagastrodiae_C368-T01_good_13.690
SRR6049663Rhizomagastrodiae_C368-T01_good_13.090
SRR6049664Rhizomagastrodiae_C368-T10_good_12.150
SRR6049665Rhizomagastrodiae_C368-T10_good_12.150
SRP279888GastroGastrodia elata tuber 4.31
JuvenJuvenile tuber3.32
Mother_GastroMother tuber of Gastrodia elata 2.12
Mother_JuvenMother tuber of Juvenile 1.68